RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 MED13LQ71F56 2210 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 MYCNOSP40205 109 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 POU2AF1Q16633 256 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 LYPD2Q6UXB3 125 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 MLST8Q9BVC4 326 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 PRSS22Q9GZN4 317 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 MS4A6AQ9H2W1 248 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 NCOR1P1Q9H4R4 102 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 RABAC1Q9UI14 185 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 TRAV8-1A0A0A6YYK1 113 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 SLC25A17O43808 307 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 LINC00305Q7Z4B0 112 aa11.36□□□□□ -0.59
USP48-213ENST00000529637 CHTOPQ9Y3Y2 248 aaKnown RBP11.36□□□□□ -0.59
USP48-213ENST00000529637 IGHV3-21A0A0B4J1V1 117 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 CHEK1O14757 476 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 P01737 135 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 OR5AL1P0C617 328 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 FGF6P10767 208 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
USP48-213ENST00000529637 ABHD17AQ96GS6 310 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 GPR82Q96P67 336 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 DLX1P56177 255 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 IGKV1D-37A0A075B6S9 117 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 A8MWL6 223 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 ORM2P19652 201 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 FXYD7P58549 80 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 HCP5Q6MZN7 132 aa11.35□□□□□ -0.59
USP48-213ENST00000529637 CSMD1Q96PZ7 3565 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 ANKHD1Q8IWZ3 2542 aaKnown RBP11.34□□□□□ -0.59
USP48-213ENST00000529637 C9orf118A6NHY6 69 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 DLL1O00548 723 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 FAM162BQ5T6X4 162 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 PRSS57Q6UWY2 283 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 OR4A5Q8NH83 315 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 NDFIP1Q9BT67 221 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 ZNF747Q9BV97 191 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 C19orf71A6NCJ1 209 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 VSTM5A8MXK1 200 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 CIDEAO60543 219 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
USP48-213ENST00000529637 LOXL1Q08397 574 aaPredicted RBP11.34□□□□□ -0.59
USP48-213ENST00000529637 TEX36Q5VZQ5 186 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 CIARTQ8N365 385 aaPredicted RBP11.34□□□□□ -0.59
USP48-213ENST00000529637 OR4C13Q8NGP0 309 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 TACC2O95359 2948 aa11.34□□□□□ -0.59
USP48-213ENST00000529637 C3orf36Q3SXR2 165 aa11.33□□□□□ -0.59
USP48-213ENST00000529637 RBPMS2Q6ZRY4 209 aaKnown RBP11.33□□□□□ -0.59
USP48-213ENST00000529637 ZNF833PQ6ZTB9 187 aa11.33□□□□□ -0.59
USP48-213ENST00000529637 PDPNQ86YL7 162 aa11.33□□□□□ -0.59
USP48-213ENST00000529637 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.59
USP48-213ENST00000529637 KIR3DS1Q14943 382 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 AP1S3Q96PC3 154 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 HSPB8Q9UJY1 196 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 SPTBN1Q01082 2364 aaKnown RBP11.33□□□□□ -0.6
USP48-213ENST00000529637 K7EP34 96 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 OVOL3O00110 214 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 GNG7O60262 68 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 LGALS7P47929 136 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 SEC11AP67812 179 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 NUP37Q8NFH4 326 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.6
USP48-213ENST00000529637 A0A0G2JLM5 398 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 TMEM178BH3BS89 294 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 SUB1P53999 127 aaKnown RBP eCLIP11.32□□□□□ -0.64e-6■■■□□ 16.9
USP48-213ENST00000529637 WT1-ASQ06250 92 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 MEF2CQ06413 473 aaPredicted RBP11.32□□□□□ -0.6
USP48-213ENST00000529637 GTF2H5Q6ZYL4 71 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 TPSG1Q9NRR2 321 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 NDUFA4L2Q9NRX3 87 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.32□□□□□ -0.6
USP48-213ENST00000529637 TM4SF20Q53R12 229 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 NEGR1Q7Z3B1 354 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 VSTM2AQ8TAG5 236 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 TMEM186Q96B77 213 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 COL6A6A6NMZ7 2263 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 WNK2Q9Y3S1 2297 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
USP48-213ENST00000529637 FAM87AP0C7U9 286 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 AP5S1Q9NUS5 200 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 THYN1Q9P016 225 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 H3BRM9 83 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 VMA21Q3ZAQ7 101 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 DAZAP1Q96EP5 407 aaKnown RBP11.31□□□□□ -0.6
USP48-213ENST00000529637 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
USP48-213ENST00000529637 LTAP01374 205 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 THBDP07204 575 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 ARMS2P0C7Q2 107 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 OR5AN1Q8NGI8 311 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 LINC00574Q9H8X3 128 aa11.31□□□□□ -0.6
USP48-213ENST00000529637 A0A096LNJ9 63 aa11.3□□□□□ -0.6
USP48-213ENST00000529637 TCRBV4S1A1TA0A5B7 111 aa11.3□□□□□ -0.6
USP48-213ENST00000529637 CGB1A6NKQ9 187 aa11.3□□□□□ -0.6
USP48-213ENST00000529637 LYNX1G3V0Z9 82 aa11.3□□□□□ -0.6
USP48-213ENST00000529637 LYNX1P0DP58 116 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms