RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 C19orf35Q6ZS72 473 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 KRTAP11-1Q8IUC1 163 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 LINC01561Q8N1V8 128 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 LINC00469Q8N7U9 141 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 ACOT12Q8WYK0 555 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 BORCS5Q969J3 196 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 EEF1AKMT3Q96AZ1 226 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 ZNF436Q9C0F3 470 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-212ENST00000529046 CCDC90BQ9GZT6 254 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 VCX3BQ9H321 246 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 NUDT15Q9NV35 164 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 ANXA10Q9UJ72 324 aa3.16□□□□□ -1.9
CSDE1-212ENST00000529046 IGHV1OR15-1A0A075B7D0 117 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 LOC102724200A0A096LPH7 203 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-212ENST00000529046 A0A1B0GW64 132 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 TMEM213A2RRL7 107 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 NUPR2A6NF83 97 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 ZNF705EA8MWA4 302 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-212ENST00000529046 E7EUB6 86 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 ATP5LO75964 103 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 TMEM50AO95807 157 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 HPRT1P00492 218 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 CD5P06127 495 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 NQO2P16083 231 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 HLA-GP17693 338 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 HTR2BP41595 481 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 CBX5P45973 191 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 AQP4P55087 323 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 CMC4P56277 68 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-212ENST00000529046 ARPC4P59998 168 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 GABARAPL2P60520 117 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 RPL30P62888 115 aaKnown RBP3.15□□□□□ -1.91
CSDE1-212ENST00000529046 LAGE3Q14657 143 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 USF2Q15853 346 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-212ENST00000529046 HES5Q5TA89 166 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 OR8G2PQ6IF36 304 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 CLEC19AQ6UXS0 136 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 TMEM61Q8N0U2 210 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 DEFB125Q8N687 156 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 ZNF502Q8TBZ5 544 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 DYNLRB2Q8TF09 96 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 C16orf74Q96GX8 76 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 DCUN1D5Q9BTE7 237 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 GGTLC1Q9BX51 225 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 COMMD9Q9P000 198 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 PRO0461Q9UI25 63 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 UFC1Q9Y3C8 167 aa3.15□□□□□ -1.91
CSDE1-212ENST00000529046 IGKV1D-13A0A0B4J2D9 117 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 IGLC7A0M8Q6 106 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 PPP5D1E7EU14 171 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 NDUFA4O00483 81 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 PPYP01298 95 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 IGHV3-48P01763 117 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 PRH1P02810 166 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 S100A6P06703 90 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 SERPINE2P07093 398 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 IGKV1-13P0DP09 117 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 DEFA4P12838 97 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 NFYAP23511 347 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-212ENST00000529046 APOC4P55056 127 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 TCTAP57738 103 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 OR10A3P58181 314 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 GNG2P59768 71 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 OR2B8PP59922 312 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 CATR1Q13166 79 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 LAMTOR1Q6IAA8 161 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 CEMP1Q6PRD7 247 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-212ENST00000529046 PLET1Q6UQ28 207 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 GDPD1Q8N9F7 314 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 OR5B3Q8NH48 314 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 TCTEX1D2Q8WW35 142 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 MAFIPQ8WZ33 124 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 OR10C1Q96KK4 312 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 FAM210AQ96ND0 272 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 NIPSNAP3BQ9BS92 247 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 ATG5Q9H1Y0 275 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 DAZ1Q9NQZ3 744 aaKnown RBP3.14□□□□□ -1.91
CSDE1-212ENST00000529046 NDUFA4L2Q9NRX3 87 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 TXNL4BQ9NX01 149 aaKnown RBP3.14□□□□□ -1.91
CSDE1-212ENST00000529046 FKBP11Q9NYL4 201 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 RAB26Q9ULW5 256 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 SSR3Q9UNL2 185 aa3.14□□□□□ -1.91
CSDE1-212ENST00000529046 TNCP24821 2201 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 TRAV2A0A0B4J234 112 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 FAM231BA6NCW3 169 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 TMEM235A6NFC5 223 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 INS-IGF2F8WCM5 200 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 UPK2O00526 184 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 RTL8CO15255 209 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 HLA-AP01891 365 aaKnown RBP3.13□□□□□ -1.91
CSDE1-212ENST00000529046 APELAP0DMC3 54 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 GNRHRP30968 328 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 DEFA5Q01523 94 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 GUCA2BQ16661 112 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 C10orf55Q5SWW7 151 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 LGALS9CQ6DKI2 356 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 C22orf42Q6IC83 251 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 LPCAT3Q6P1A2 487 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 SFXN4Q6P4A7 337 aa3.13□□□□□ -1.91
CSDE1-212ENST00000529046 ZNF773Q6PK81 442 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms