RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 KIR3DS1Q14943 382 aa12.96□□□□□ -0.33
SSRP1-204ENST00000529002 NOXA1Q86UR1 476 aa12.96□□□□□ -0.33
SSRP1-204ENST00000529002 LGI3Q8N145 548 aa12.96□□□□□ -0.33
SSRP1-204ENST00000529002 LINC00612Q8N6U2 182 aa12.96□□□□□ -0.33
SSRP1-204ENST00000529002 SLC35E1Q96K37 410 aa12.96□□□□□ -0.33
SSRP1-204ENST00000529002 RBKSQ9H477 322 aa12.96□□□□□ -0.33
SSRP1-204ENST00000529002 A0A087WTM6 91 aa12.95□□□□□ -0.34
SSRP1-204ENST00000529002 GATA2P23769 480 aaPredicted RBP12.95□□□□□ -0.34
SSRP1-204ENST00000529002 SAMD13Q5VXD3 122 aa12.95□□□□□ -0.34
SSRP1-204ENST00000529002 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
SSRP1-204ENST00000529002 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
SSRP1-204ENST00000529002 OR52I2Q8NH67 350 aa12.95□□□□□ -0.34
SSRP1-204ENST00000529002 TERB2Q8NHR7 220 aa12.95□□□□□ -0.34
SSRP1-204ENST00000529002 RTBDNQ9BSG5 229 aaPredicted RBP12.95□□□□□ -0.34
SSRP1-204ENST00000529002 NAA60Q9H7X0 242 aa12.95□□□□□ -0.34
SSRP1-204ENST00000529002 A0A096LPF7 62 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 SIVA1O15304 175 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 HPGDSO60760 199 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 APOA1P02647 267 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 TMEM182Q6ZP80 229 aaPredicted RBP12.94□□□□□ -0.34
SSRP1-204ENST00000529002 TMEM256Q8N2U0 113 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 DTD1Q8TEA8 209 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
SSRP1-204ENST00000529002 VSIG2Q96IQ7 327 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 TRGV9Q99603 122 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 VCX3BQ9H321 246 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 U3KQ87 197 aa12.94□□□□□ -0.34
SSRP1-204ENST00000529002 SULT1A3P0DMM9 295 aa12.93□□□□□ -0.34
SSRP1-204ENST00000529002 SULT1A4P0DMN0 295 aa12.93□□□□□ -0.34
SSRP1-204ENST00000529002 GPX4P36969 197 aaPredicted RBP12.93□□□□□ -0.34
SSRP1-204ENST00000529002 FAAP20Q6NZ36 180 aa12.93□□□□□ -0.34
SSRP1-204ENST00000529002 PARD6GQ9BYG4 376 aaPredicted RBP12.93□□□□□ -0.34
SSRP1-204ENST00000529002 TMPRSS5Q9H3S3 457 aa12.93□□□□□ -0.34
SSRP1-204ENST00000529002 GABARAPH6UMI1 98 aa12.92□□□□□ -0.34
SSRP1-204ENST00000529002 GABARAPO95166 117 aa12.92□□□□□ -0.34
SSRP1-204ENST00000529002 TNFAIP8O95379 198 aa12.92□□□□□ -0.34
SSRP1-204ENST00000529002 GCSHP23434 173 aa12.92□□□□□ -0.34
SSRP1-204ENST00000529002 ZNF493Q6ZR52 646 aa12.92□□□□□ -0.34
SSRP1-204ENST00000529002 OR8A1Q8NGG7 326 aa12.92□□□□□ -0.34
SSRP1-204ENST00000529002 PPP1R14DQ9NXH3 145 aa12.92□□□□□ -0.34
SSRP1-204ENST00000529002 B3GALNT1O75752 331 aa12.91□□□□□ -0.34
SSRP1-204ENST00000529002 FABP1P07148 127 aa12.91□□□□□ -0.34
SSRP1-204ENST00000529002 ORM2P19652 201 aa12.91□□□□□ -0.34
SSRP1-204ENST00000529002 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
SSRP1-204ENST00000529002 NXPH4O95158 308 aa12.9□□□□□ -0.34
SSRP1-204ENST00000529002 THAP8Q8NA92 274 aa12.9□□□□□ -0.34
SSRP1-204ENST00000529002 OR1B1Q8NGR6 318 aa12.9□□□□□ -0.34
SSRP1-204ENST00000529002 MTFP1Q9UDX5 166 aa12.9□□□□□ -0.34
SSRP1-204ENST00000529002 C14orf166Q9Y224 244 aaKnown RBP12.9□□□□□ -0.34
SSRP1-204ENST00000529002 H3BNG1 76 aa12.89□□□□□ -0.35
SSRP1-204ENST00000529002 RAB3DO95716 219 aa12.89□□□□□ -0.35
SSRP1-204ENST00000529002 RLN2P04090 185 aa12.89□□□□□ -0.35
SSRP1-204ENST00000529002 Q6ZTI0 123 aa12.89□□□□□ -0.35
SSRP1-204ENST00000529002 TMED4Q7Z7H5 227 aa12.89□□□□□ -0.35
SSRP1-204ENST00000529002 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
SSRP1-204ENST00000529002 TMEM56-RWDD3S4R434 201 aa12.89□□□□□ -0.35
SSRP1-204ENST00000529002 CRYM-AS1A6NIL9 109 aa12.88□□□□□ -0.35
SSRP1-204ENST00000529002 OR4D5Q8NGN0 318 aa12.88□□□□□ -0.35
SSRP1-204ENST00000529002 IL22RA2Q969J5 263 aa12.88□□□□□ -0.35
SSRP1-204ENST00000529002 HMCN2Q8NDA2 5059 aa12.88□□□□□ -0.35
SSRP1-204ENST00000529002 FAM25AB3EWG3 89 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 FAM25CB3EWG5 89 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 FAM25GB3EWG6 89 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 H7BYZ3 331 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 ADAP1O75689 374 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 IAPPP10997 89 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 CXCL3P19876 107 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 CDKN1BP46527 198 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 GPR107Q5VW38 600 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 GGNBP1Q5YKI7 109 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 LYZL2Q7Z4W2 148 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 YIPF6Q96EC8 236 aa12.87□□□□□ -0.35
SSRP1-204ENST00000529002 KRTAP29-1A8MX34 341 aaPredicted RBP12.86□□□□□ -0.35
SSRP1-204ENST00000529002 TBPP20226 339 aa12.86□□□□□ -0.35
SSRP1-204ENST00000529002 SMCO1Q147U7 214 aa12.86□□□□□ -0.35
SSRP1-204ENST00000529002 PSG3Q16557 428 aa12.86□□□□□ -0.35
SSRP1-204ENST00000529002 STEAP1BQ6NZ63 245 aa12.86□□□□□ -0.35
SSRP1-204ENST00000529002 TMEM229BQ8NBD8 167 aa12.86□□□□□ -0.35
SSRP1-204ENST00000529002 TMEM147Q9BVK8 224 aa12.86□□□□□ -0.35
SSRP1-204ENST00000529002 FAM30AQ9NZY2 134 aa12.86□□□□□ -0.35
SSRP1-204ENST00000529002 SLC45A2Q9UMX9 530 aa12.86□□□□□ -0.35
SSRP1-204ENST00000529002 SNURFLB1AK76 121 aa12.85□□□□□ -0.35
SSRP1-204ENST00000529002 H3BRN7 92 aa12.85□□□□□ -0.35
SSRP1-204ENST00000529002 J3KRW8 73 aa12.85□□□□□ -0.35
SSRP1-204ENST00000529002 CCR6P51684 374 aa12.85□□□□□ -0.35
SSRP1-204ENST00000529002 NCS1P62166 190 aa12.85□□□□□ -0.35
SSRP1-204ENST00000529002 GPR82Q96P67 336 aa12.85□□□□□ -0.35
SSRP1-204ENST00000529002 GPR132Q9UNW8 380 aa12.85□□□□□ -0.35
SSRP1-204ENST00000529002 SNRPCP09234 159 aaKnown RBP12.84□□□□□ -0.35
SSRP1-204ENST00000529002 TAS2R19P59542 299 aa12.84□□□□□ -0.35
SSRP1-204ENST00000529002 GFI1BQ5VTD9 330 aa12.84□□□□□ -0.35
SSRP1-204ENST00000529002 CCDC28AQ8IWP9 274 aa12.84□□□□□ -0.35
SSRP1-204ENST00000529002 BPIFCQ8NFQ6 507 aa12.84□□□□□ -0.35
SSRP1-204ENST00000529002 RPUSD4Q96CM3 377 aaKnown RBP12.84□□□□□ -0.35
SSRP1-204ENST00000529002 LRP1Q07954 4544 aaKnown RBP12.83□□□□□ -0.36
SSRP1-204ENST00000529002 OR1S1Q8NH92 325 aa12.83□□□□□ -0.36
SSRP1-204ENST00000529002 EXTL2Q9UBQ6 330 aa12.83□□□□□ -0.36
SSRP1-204ENST00000529002 DNAH8Q96JB1 4490 aa12.82□□□□□ -0.36
SSRP1-204ENST00000529002 PRSS46E5RG02 174 aa12.82□□□□□ -0.36
SSRP1-204ENST00000529002 CFDP00746 253 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms