RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 VDAC2P45880 294 aaPredicted RBP3.83□□□□□ -1.8
CD44-230ENST00000528922 EDDM3BP56851 147 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 KLF3P57682 345 aaPredicted RBP3.83□□□□□ -1.8
CD44-230ENST00000528922 RPL31P62899 125 aaKnown RBP3.83□□□□□ -1.8
CD44-230ENST00000528922 MEF2CQ06413 473 aaPredicted RBP3.83□□□□□ -1.8
CD44-230ENST00000528922 AESQ08117 197 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 HLA-DRB5Q30154 266 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 C2orf83Q53S99 150 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 TIMM23BQ5SRD1 257 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 SPATA46Q5T0L3 261 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 SIGLEC15Q6ZMC9 328 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 TEX43Q6ZNM6 134 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 LINC00696Q6ZRV3 163 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 C8orf31Q8N9H6 132 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 NECAP1Q8NC96 275 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 LRRC29Q8WV35 223 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 SNRNP40Q96DI7 357 aaKnown RBP3.83□□□□□ -1.8
CD44-230ENST00000528922 ZNF488Q96MN9 340 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 WFIKKN1Q96NZ8 548 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 GGTLC1Q9BX51 225 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 TMEM14BQ9NUH8 114 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 CLCF1Q9UBD9 225 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 CTSZQ9UBR2 303 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 UQCR10Q9UDW1 63 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 NAT8BQ9UHF3 227 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 AHCTF1Q8WYP5 2266 aa3.83□□□□□ -1.8
CD44-230ENST00000528922 PTPRBP23467 1997 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 KBTBD11-OT1A0A1B0GTJ5 212 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 SPAARA0A1B0GVQ0 90 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 A0A1B0GW15 77 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 IZUMO1RA6ND01 250 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 SRRM4A7MD48 611 aaKnown RBP3.82□□□□□ -1.8
CD44-230ENST00000528922 C15orf65H3BRN8 121 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 RAMP3O60896 148 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 SCGB2A1O75556 95 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 C8orf88P0DMB2 117 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 GATA1P15976 413 aaPredicted RBP3.82□□□□□ -1.8
CD44-230ENST00000528922 RPL30P62888 115 aaKnown RBP3.82□□□□□ -1.8
CD44-230ENST00000528922 MRPS11P82912 194 aaKnown RBP3.82□□□□□ -1.8
CD44-230ENST00000528922 PRCDQ00LT1 54 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 TFF3Q07654 80 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 GUSBP1Q15486 140 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 IBA57Q5T440 356 aaKnown RBP3.82□□□□□ -1.8
CD44-230ENST00000528922 ZNF705AQ6ZN79 300 aaPredicted RBP3.82□□□□□ -1.8
CD44-230ENST00000528922 BHLHA15Q7RTS1 189 aaPredicted RBP3.82□□□□□ -1.8
CD44-230ENST00000528922 SSX7Q7RTT5 188 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 BATF2Q8N1L9 274 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 OR2Z1Q8NG97 314 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 OR1L6Q8NGR2 347 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 OR10X1Q8NGY0 326 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 FAM222BQ8WU58 562 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 TMEM186Q96B77 213 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 COQ2Q96H96 371 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 KCNS1Q96KK3 526 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 ZNF714Q96N38 554 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 TBX15Q96SF7 602 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 DEFB127Q9H1M4 99 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 PRO1933Q9H354 126 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 LINC00574Q9H8X3 128 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 SLC35D1Q9NTN3 355 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 CALYQ9NYX4 217 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 TBL2Q9Y4P3 447 aaKnown RBP3.82□□□□□ -1.8
CD44-230ENST00000528922 GTF3C1Q12789 2109 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 PCNX1Q96RV3 2341 aa3.82□□□□□ -1.8
CD44-230ENST00000528922 DSCAML1Q8TD84 2053 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 TRAV38-1A0A0B4J264 116 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 IGHV2OR16-5A0A0B4J2B6 119 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 IGKV3D-20A0A0C4DH25 116 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 A0A1B0GV90 55 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 FBLL1A6NHQ2 334 aaKnown RBP3.81□□□□□ -1.8
CD44-230ENST00000528922 A8MWL6 223 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 HSBP1L1C9JCN9 74 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 K7EQM0 130 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 UPK2O00526 184 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 OR7C2O60412 319 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 CD55P08174 381 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 OR5AL1P0C617 328 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 OR9G9P0C7N8 305 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 LINC00869P0C866 280 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 LGALS7P47929 136 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 PPOXP50336 477 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 UBE2G2P60604 165 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 LMO4P61968 165 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 UBE2G1P62253 170 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 PAX2Q02962 417 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 PSG5Q15238 335 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 VMA21Q3ZAQ7 101 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 IGFL2Q6UWQ7 119 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 Q71RC1 249 aaPredicted RBP3.81□□□□□ -1.8
CD44-230ENST00000528922 WDR86Q86TI4 376 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 LRP11Q86VZ4 500 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 PDPNQ86YL7 162 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 C11orf53Q8IXP5 236 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 ABHD12Q8N2K0 398 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 ZADH2Q8N4Q0 377 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 CNEP1R1Q8N9A8 125 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 OR5T1Q8NG75 326 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 OR4P4Q8NGL7 312 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 TNFRSF14Q92956 283 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms