RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, human

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSTF3-208	ENST00000528865	RIG	Q13278	110 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	PDE6H	Q13956	83 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	PSG3	Q16557	428 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	KLK9	Q2XQG4	91 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	PRR30	Q53SZ7	412 aa	Predicted RBP	6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	C1orf122	Q6ZSJ8	110 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	GOLT1A	Q6ZVE7	132 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	S100A7A	Q86SG5	101 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZGRF1	Q86YA3	2104 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	OR4F17	Q8NGA8	305 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	ORAOV1	Q8WV07	137 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	ST20	Q9HBF5	79 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	KLK9	Q9UKQ9	250 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	PLXNB1	O43157	2135 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	IGLV11-55	A0A075B6I3	123 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	TRAV8-1	A0A0A6YYK1	113 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	IGHV1-24	A0A0C4DH33	117 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865		A0A1B0GUT8	65 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	FBLL1	A6NHQ2	334 aa	Known RBP	6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865		K7EQM0	130 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	TIMM23	O14925	209 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	SIAH2	O43255	324 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	LEPROTL1	O95214	131 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	CNIH1	O95406	144 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	HLA-DRB1	P01911	266 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	APELA	P0DMC3	54 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	PRTN3	P24158	256 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	CRIP1	P50238	77 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	EBI3	Q14213	229 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	MAJIN	Q3KP22	176 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865		Q56UQ5	140 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865		Q6AWC8	147 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZNF493	Q6ZR52	646 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	TTC9C	Q8N5M4	171 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	LINC01560	Q8TB33	94 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	NEU4	Q8WWR8	484 aa	Predicted RBP	6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	IGFBPL1	Q8WX77	278 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	RNF125	Q96EQ8	232 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZC2HC1A	Q96GY0	325 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	C17orf77	Q96MU5	243 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	FANCD2OS	Q96PS1	177 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	PPP1R14D	Q9NXH3	145 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	CLEC5A	Q9NY25	188 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865		U3KQK5	164 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	MALRD1	Q5VYJ5	2156 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	NAV3	Q8IVL0	2385 aa		6.59	□□□□□ -1.35
CSTF3-208	ENST00000528865	FRYL	O94915	3013 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	OOSP1	A8MZH6	123 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865		F8W735	103 aa	Predicted RBP	6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	FCGR2B	P31994	310 aa	Predicted RBP	6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	CEACAM3	P40198	252 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	TFPI2	P48307	235 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	MFAP4	P55083	255 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	PRB3	Q04118	309 aa	Predicted RBP	6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	PLGLA	Q15195	96 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	BATF	Q16520	125 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	C5orf64	Q2M2E5	130 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	ZNF562	Q6V9R5	426 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	ATOH7	Q8N100	152 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865		Q8N6K4	173 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	MS4A6A	Q9H2W1	248 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	FREM2	Q5SZK8	3169 aa		6.58	□□□□□ -1.36
CSTF3-208	ENST00000528865	EP300	Q09472	2414 aa	Predicted RBP	6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	CNOT1	A5YKK6	2376 aa	Known RBP	6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	OR4C46	A6NHA9	309 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	CD24	P25063	80 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	PSG9	Q00887	426 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	SRSF2	Q01130	221 aa	Known RBP	6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	LINC01545	Q5VT33	79 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	C11orf71	Q6IPW1	123 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	LINC00173	Q6ZV60	143 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865		Q71RC1	249 aa	Predicted RBP	6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	TMUB1	Q9BVT8	246 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	TMEM191A	Q9H0A3	160 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	ONECUT1	Q9UBC0	465 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	HSPB8	Q9UJY1	196 aa		6.57	□□□□□ -1.36
CSTF3-208	ENST00000528865	CUL9	Q8IWT3	2517 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	LOC105371242	A0A075B767	164 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865		M0QZ24	198 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	IL4	P05112	153 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	ARMS2	P0C7Q2	107 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	RPS20	P60866	119 aa	Known RBP	6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	ARF6	P62330	175 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	MINOS1	Q5TGZ0	78 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	TIMD4	Q96H15	378 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	PSMG3-AS1	Q96PY0	264 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	MAP1LC3C	Q9BXW4	147 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	NPFFR1	Q9GZQ6	430 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	MINOS1-NBL1	R4GNA1	71 aa		6.56	□□□□□ -1.36
CSTF3-208	ENST00000528865	GNG7	O60262	68 aa		6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	EGR2	P11161	476 aa	Predicted RBP	6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	RPL7	P18124	248 aa	Known RBP	6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	CSN1S1	P47710	185 aa		6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	HINT1	P49773	126 aa	Predicted RBP	6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	SAPCD1	Q5SSQ6	148 aa		6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	FAM104B	Q5XKR9	115 aa		6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	CCDC144NL	Q6NUI1	221 aa		6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	BCL6B	Q8N143	479 aa	Predicted RBP	6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	ARPC1A	Q92747	370 aa		6.55	□□□□□ -1.36
CSTF3-208	ENST00000528865	DPF1	Q92782	380 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms