RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PDE6HQ13956 83 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 USF2Q15853 346 aaPredicted RBP6.03□□□□□ -1.44
SSBP3-211ENST00000528787 DEFB114Q30KQ6 69 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 FAM78BQ5VT40 261 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 C16orf54Q6UWD8 224 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 LCN15Q6UWW0 184 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 C9orf62Q8N4C0 152 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 RNF141Q8WVD5 230 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 SLC50A1Q9BRV3 221 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 NKX6-2Q9C056 277 aaPredicted RBP6.03□□□□□ -1.44
SSBP3-211ENST00000528787 NRN1Q9NPD7 142 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 TMEM167BQ9NRX6 74 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 TENM1Q9UKZ4 2725 aa6.03□□□□□ -1.44
SSBP3-211ENST00000528787 CTXND1A0A1B0GTU2 59 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 ZNF253O75346 499 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 CXorf1O96002 111 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 TAGLN2P37802 199 aaKnown RBP6.02□□□□□ -1.45
SSBP3-211ENST00000528787 SPATA31B1PQ5VZV4 182 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 TCF24Q7RTU0 167 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 LYPD1Q8N2G4 141 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 ST8SIA2Q92186 375 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 RSG1Q9BU20 258 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 AAMDCQ9H7C9 122 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 SLC25A22Q9H936 323 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 WFDC1Q9HC57 220 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 DOK5Q9P104 306 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 MLXQ9UH92 298 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 PRELID1Q9Y255 219 aa6.02□□□□□ -1.45
SSBP3-211ENST00000528787 SORL1Q92673 2214 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 A0A087X0K7 114 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 ISLRO14498 428 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 ZNF207O43670 478 aaKnown RBP6.01□□□□□ -1.45
SSBP3-211ENST00000528787 OR7C2O60412 319 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 HIST1H1EP10412 219 aaKnown RBP6.01□□□□□ -1.45
SSBP3-211ENST00000528787 GATA2P23769 480 aaPredicted RBP6.01□□□□□ -1.45
SSBP3-211ENST00000528787 PSMB3P49720 205 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 BLOC1S1P78537 153 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 GLMPQ8WWB7 406 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 TMEM37Q8WXS4 190 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 TCEAL7Q9BRU2 100 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 OR51M1Q9H341 326 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 HRH4Q9H3N8 390 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 CYTL1Q9NRR1 136 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 ZNF256Q9Y2P7 627 aaPredicted RBP6.01□□□□□ -1.45
SSBP3-211ENST00000528787 ARL2-SNX15V9GYD0 113 aa6.01□□□□□ -1.45
SSBP3-211ENST00000528787 K7EQM0 130 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 IFNA1P01562 189 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 IGLL1P15814 213 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 CSN1S1P47710 185 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 RAB14P61106 215 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 EGFEM1PQ0D2K5 195 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 GUCA2BQ16661 112 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 CD300EQ496F6 205 aaPredicted RBP6□□□□□ -1.45
SSBP3-211ENST00000528787 FAM122CQ6P4D5 195 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 IL34Q6ZMJ4 242 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 TMEM182Q6ZP80 229 aaPredicted RBP6□□□□□ -1.45
SSBP3-211ENST00000528787 ARL6IP6Q8N6S5 226 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 SUN5Q8TC36 379 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 SAT2Q96F10 170 aaPredicted RBP6□□□□□ -1.45
SSBP3-211ENST00000528787 C16orf92Q96LL3 132 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 TXNDC17Q9BRA2 123 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 PAXXQ9BUH6 204 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 RPRMQ9NS64 109 aa6□□□□□ -1.45
SSBP3-211ENST00000528787 IGHV3OR16-8A0A075B7F1 116 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 SERTM2A0A1B0GWG4 89 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 FBLL1A6NHQ2 334 aaKnown RBP5.99□□□□□ -1.45
SSBP3-211ENST00000528787 OR11H12B2RN74 326 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 H2AFB1P0C5Y9 115 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 STAG3L2P0CL84 134 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 STAG3L3P0CL85 134 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 GP9P14770 177 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 SULT1A2P50226 295 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 UBE2L3P68036 154 aaKnown RBP5.99□□□□□ -1.45
SSBP3-211ENST00000528787 SAMD5Q5TGI4 173 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 FAM90A2PQ658T7 463 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 PATE2Q6UY27 113 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 TMEM61Q8N0U2 210 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 RXFP4Q8TDU9 374 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 TMED6Q8WW62 240 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 RAB24Q969Q5 203 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 MRPL53Q96EL3 112 aaKnown RBP5.99□□□□□ -1.45
SSBP3-211ENST00000528787 UHRF2Q96PU4 802 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 SCRT1Q9BWW7 348 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 MS4A6AQ9H2W1 248 aa5.99□□□□□ -1.45
SSBP3-211ENST00000528787 IGHV3-49A0A0A0MS15 119 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 TRAV1-1A0A0B4J248 108 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 MAP1LC3B2A6NCE7 125 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 ZNF705EA8MWA4 302 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-211ENST00000528787 F6UZH7 168 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 NBEAP1P0C6P0 100 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 NUTF2P61970 127 aaKnown RBP5.98□□□□□ -1.45
SSBP3-211ENST00000528787 EBLN2Q6P2I7 272 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 ZNF767PQ75MW2 155 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 CMTM2Q8TAZ6 248 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 FAM213BQ8TBF2 198 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 ZNF414Q96IQ9 312 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 MAP1LC3BQ9GZQ8 125 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 SH3BGRL3Q9H299 93 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 MANBALQ9NQG1 85 aa5.98□□□□□ -1.45
SSBP3-211ENST00000528787 UBQLN2Q9UHD9 624 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms