RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 A0A1W2PRD5 423 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 A0A1W2PRF3 423 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 A0A1W2PRM7 423 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 XKRY2A2RUG3 117 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 PGPEP1LA6NFU8 196 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 GNG7O60262 68 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 TOMM40O96008 361 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 SLC25A5P05141 298 aaKnown RBP9.27□□□□□ -0.93
USF1-208ENST00000528768 APELAP0DMC3 54 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 PYYP10082 97 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 MGST1P10620 155 aaKnown RBP9.27□□□□□ -0.93
USF1-208ENST00000528768 ZFP36P26651 326 aaKnown RBP9.27□□□□□ -0.93
USF1-208ENST00000528768 YPEL3P61236 119 aaPredicted RBP9.27□□□□□ -0.93
USF1-208ENST00000528768 BAGE2Q86Y30 109 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 TMEM183AQ8IXX5 376 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 TTC9CQ8N5M4 171 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 Q8N6K4 173 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 OR4F17Q8NGA8 305 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 BPESC1Q9GZL8 116 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 EPDR1Q9UM22 224 aa9.27□□□□□ -0.93
USF1-208ENST00000528768 IGHV3-21A0A0B4J1V1 117 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 PGPA6NDG6 321 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 PCP4L1A6NKN8 68 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 MT-ND6P03923 174 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 HIST1H1EP10412 219 aaKnown RBP9.26□□□□□ -0.93
USF1-208ENST00000528768 PSG1P11464 419 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 LMO4P61968 165 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 CX3CL1P78423 397 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 COA6Q5JTJ3 125 aaKnown RBP9.26□□□□□ -0.93
USF1-208ENST00000528768 DNLZQ5SXM8 178 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 IBA57Q5T440 356 aaKnown RBP9.26□□□□□ -0.93
USF1-208ENST00000528768 BPIFA4PQ86YQ2 179 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 HIST3H2BBQ8N257 126 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 C5orf17Q8NAS9 161 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 CMTM2Q8TAZ6 248 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 TXN2Q99757 166 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 POLR3KQ9Y2Y1 108 aaPredicted RBP9.26□□□□□ -0.93
USF1-208ENST00000528768 VWFP04275 2813 aa9.26□□□□□ -0.93
USF1-208ENST00000528768 B4DSR2 109 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 K7EIM0 57 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 K7EN84 100 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 K7EQM0 130 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 PHOX2AO14813 284 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
USF1-208ENST00000528768 RANP62826 216 aaKnown RBP9.25□□□□□ -0.93
USF1-208ENST00000528768 TMEM183BQ1AE95 376 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 LDLRAD2Q5SZI1 272 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 MORN5Q5VZ52 161 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 FAM231DQ6ZW35 169 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 BLNKQ8WV28 456 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 FMC1Q96HJ9 113 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 IGF2BP2-AS1Q96M15 143 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 ATG101Q9BSB4 218 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
USF1-208ENST00000528768 SERTAD4Q9NUC0 356 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 V9GYV3 84 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 TRRAPQ9Y4A5 3859 aa9.25□□□□□ -0.93
USF1-208ENST00000528768 IGLV11-55A0A075B6I3 123 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 ZNF705GA8MUZ8 300 aaPredicted RBP9.24□□□□□ -0.93
USF1-208ENST00000528768 NPFFO15130 113 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 HLA-DRB1P01911 266 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 MYCNOSP40205 109 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 RPL15P61313 204 aaKnown RBP9.24□□□□□ -0.93
USF1-208ENST00000528768 Q56UQ5 140 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 LYPD1Q8N2G4 141 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 TBX15Q96SF7 602 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 SHANK2-AS3Q9BTD1 123 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 NIT2Q9NQR4 276 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 C21orf62Q9NYP8 219 aa9.24□□□□□ -0.93
USF1-208ENST00000528768 MRPL27Q9P0M9 148 aaKnown RBP9.24□□□□□ -0.93
USF1-208ENST00000528768 SLC17A3O00476 420 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 GP9P14770 177 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 OR5I1Q13606 314 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 ZNF600Q6ZNG1 722 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 OR10D4PQ8NGN7 298 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 VN1R17PQ8TDU5 208 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 RNF125Q96EQ8 232 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 GRAMD2BQ96HH9 432 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 GPR82Q96P67 336 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 GPR61Q9BZJ8 451 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 Q9H3A6 140 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 KLF12Q9Y4X4 402 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 DMRT1Q9Y5R6 373 aa9.23□□□□□ -0.93
USF1-208ENST00000528768 WI2-2373I1.2A0A1W2PRP0 233 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 IZUMO1RA6ND01 250 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 H3BRN7 92 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 IGKV1-17P01599 117 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 FABP4P15090 132 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 CD24P25063 80 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 SAA4P35542 130 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 USF2Q15853 346 aaPredicted RBP9.22□□□□□ -0.93
USF1-208ENST00000528768 HIST2H2BDQ6DRA6 164 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 C19orf35Q6ZS72 473 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 OR8I2Q8N0Y5 310 aa9.22□□□□□ -0.93
USF1-208ENST00000528768 FAM110DQ8TAY7 271 aaPredicted RBP9.22□□□□□ -0.93
USF1-208ENST00000528768 DAZAP1Q96EP5 407 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms