RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 RPL7L1Q6DKI1 246 aaKnown RBP7.23□□□□□ -1.25
CAPN1-210ENST00000527699 SPSB3Q6PJ21 355 aa7.23□□□□□ -1.25
CAPN1-210ENST00000527699 DHRS11Q6UWP2 260 aa7.23□□□□□ -1.25
CAPN1-210ENST00000527699 ZFP82Q8N141 532 aa7.23□□□□□ -1.25
CAPN1-210ENST00000527699 Q8N1X5 172 aa7.23□□□□□ -1.25
CAPN1-210ENST00000527699 CCDC71LQ8N9Z2 235 aa7.23□□□□□ -1.25
CAPN1-210ENST00000527699 SRSF8Q9BRL6 282 aaKnown RBP7.23□□□□□ -1.25
CAPN1-210ENST00000527699 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
CAPN1-210ENST00000527699 GSKIPQ9P0R6 139 aa7.23□□□□□ -1.25
CAPN1-210ENST00000527699 RABAC1Q9UI14 185 aa7.23□□□□□ -1.25
CAPN1-210ENST00000527699 SRRM2Q9UQ35 2752 aaKnown RBP7.22□□□□□ -1.25
CAPN1-210ENST00000527699 FAT2Q9NYQ8 4349 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 CRYM-AS1A6NIL9 109 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 KNCNA6PVL3 124 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 C15orf62A8K5M9 175 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 UMAD1C9J7I0 102 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 GNG7O60262 68 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 DFFBO76075 338 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 HOXB5P09067 269 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 RBMY1CP0DJD4 496 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 F2RP25116 425 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 S100A2P29034 98 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 POLR2GP62487 172 aaKnown RBP eCLIP7.22□□□□□ -1.25
CAPN1-210ENST00000527699 SUPT4H1P63272 117 aaKnown RBP7.22□□□□□ -1.25
CAPN1-210ENST00000527699 SRSF3P84103 164 aaKnown RBP7.22□□□□□ -1.25
CAPN1-210ENST00000527699 RELQ04864 619 aaPredicted RBP7.22□□□□□ -1.25
CAPN1-210ENST00000527699 FABP9Q0Z7S8 132 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 ZNF266Q14584 549 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 TMEM187Q14656 261 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 CLINT1Q14677 625 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 MSMO1Q15800 293 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 DNLZQ5SXM8 178 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 GINS3Q9BRX5 216 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 RTBDNQ9BSG5 229 aaPredicted RBP7.22□□□□□ -1.25
CAPN1-210ENST00000527699 EIF5A2Q9GZV4 153 aaKnown RBP7.22□□□□□ -1.25
CAPN1-210ENST00000527699 SLC35B3Q9H1N7 401 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 ARV1Q9H2C2 271 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 CLEC5AQ9NY25 188 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 APLNQ9ULZ1 77 aa7.22□□□□□ -1.25
CAPN1-210ENST00000527699 DNAH2Q9P225 4427 aa7.21□□□□□ -1.25
CAPN1-210ENST00000527699 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 C7orf77A4D0Y5 90 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 I3L2K1 104 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 M0R2N4 97 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 MLANAQ16655 118 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 FAM90A2PQ658T7 463 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 TOMM20LQ6UXN7 152 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 LRTM2Q8N967 370 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 OR4A16Q8NH70 328 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 MOB3AQ96BX8 217 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 OR10C1Q96KK4 312 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 TMEM56Q96MV1 263 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 MS4A6AQ9H2W1 248 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 GSN-AS1Q9NRJ2 163 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 PRNDQ9UKY0 176 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 TMED3Q9Y3Q3 217 aa7.21□□□□□ -1.26
CAPN1-210ENST00000527699 DNAH6Q9C0G6 4158 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 A0A087WWC5 75 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 ELOA3CA0A087WX78 387 aaPredicted RBP7.2□□□□□ -1.26
CAPN1-210ENST00000527699 C15orf61A6NNL5 157 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 IGKV1-39P01597 117 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 HBE1P02100 147 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 IGKV1D-39P04432 117 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 HLA-DMBP28068 263 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 SULT1A1P50225 295 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 SSTP61278 116 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 DPPA3Q6W0C5 159 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 H2BFWTQ7Z2G1 175 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 TBC1D26Q86UD7 250 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 STHQ8IWL8 128 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 LGI3Q8N145 548 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 STXBP6Q8NFX7 210 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 OR1P1Q8NH06 330 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 C11orf68Q9H3H3 251 aaKnown RBP7.2□□□□□ -1.26
CAPN1-210ENST00000527699 NAA60Q9H7X0 242 aa7.2□□□□□ -1.26
CAPN1-210ENST00000527699 LSM5Q9Y4Y9 91 aaKnown RBP7.2□□□□□ -1.26
CAPN1-210ENST00000527699 PUS1Q9Y606 427 aaKnown RBP eCLIP7.2□□□□□ -1.26
CAPN1-210ENST00000527699 DUXBA0A1W2PPF3 345 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 LINC00587B1AMM8 73 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 B4DEV8 164 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 AGPAT2O15120 278 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 SCGB1D2O95969 90 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 ZNF688P0C7X2 276 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 CMC4P56277 68 aaPredicted RBP7.19□□□□□ -1.26
CAPN1-210ENST00000527699 PAFAH1B2P68402 229 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 GGNBP1Q5YKI7 109 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 Q6ZTC4 211 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 CMTM1Q8IZ96 169 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 SCRT1Q9BWW7 348 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 SLC25A31Q9H0C2 315 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 TMEM14BQ9NUH8 114 aa7.19□□□□□ -1.26
CAPN1-210ENST00000527699 IGHV4-4A0A075B6R2 117 aa7.18□□□□□ -1.26
CAPN1-210ENST00000527699 A0A1B0GU03 582 aa7.18□□□□□ -1.26
CAPN1-210ENST00000527699 CDK2AP2O75956 126 aa7.18□□□□□ -1.26
CAPN1-210ENST00000527699 CDS2O95674 445 aa7.18□□□□□ -1.26
CAPN1-210ENST00000527699 IFNA10P01566 189 aa7.18□□□□□ -1.26
CAPN1-210ENST00000527699 MBPP02686 304 aaPredicted RBP7.18□□□□□ -1.26
CAPN1-210ENST00000527699 INAFM2P0DMQ5 153 aa7.18□□□□□ -1.26
CAPN1-210ENST00000527699 PI3P19957 117 aa7.18□□□□□ -1.26
CAPN1-210ENST00000527699 UCP3P55916 312 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms