RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 ZNF705GA8MUZ8 300 aaPredicted RBP12.41□□□□□ -0.42
USH1C-204ENST00000526313 IGLV2-11P01706 119 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 IGHV4-38-2P0DP08 117 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 EXOC3-AS1Q8N2X6 119 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 GRAMD2BQ96HH9 432 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 C17orf77Q96MU5 243 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 CSMD1Q96PZ7 3565 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 IGHV3-23P01764 117 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 FRMD6-AS1P0C7T7 363 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 CBLN1P23435 193 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 RHOGP84095 191 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 RPL19P84098 196 aaKnown RBP12.41□□□□□ -0.42
USH1C-204ENST00000526313 PDE6HQ13956 83 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 ECSCRQ19T08 205 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 C15orf32Q32M92 178 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 COX19Q49B96 90 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 PDZD11Q5EBL8 140 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 BRD3OSQ6XYD6 125 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 OR10D4PQ8NGN7 298 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 PRSS22Q9GZN4 317 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 ZNF492Q9P255 531 aa12.41□□□□□ -0.42
USH1C-204ENST00000526313 SPG11Q96JI7 2443 aa12.4□□□□□ -0.42
USH1C-204ENST00000526313 G3V318 75 aa12.4□□□□□ -0.42
USH1C-204ENST00000526313 GATCO43716 136 aaKnown RBP12.4□□□□□ -0.42
USH1C-204ENST00000526313 PYY3Q5JQD4 70 aa12.4□□□□□ -0.42
USH1C-204ENST00000526313 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
USH1C-204ENST00000526313 ZFYVE26Q68DK2 2539 aa12.4□□□□□ -0.42
USH1C-204ENST00000526313 IZUMO1RA6ND01 250 aa12.4□□□□□ -0.43
USH1C-204ENST00000526313 NRGNQ92686 78 aa12.4□□□□□ -0.43
USH1C-204ENST00000526313 SGK494Q96LW2 274 aa12.4□□□□□ -0.43
USH1C-204ENST00000526313 ZNF462Q96JM2 2506 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 UBR5O95071 2799 aaPredicted RBP12.39□□□□□ -0.43
USH1C-204ENST00000526313 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 SH2D7A6NKC9 451 aaPredicted RBP12.39□□□□□ -0.43
USH1C-204ENST00000526313 B4DSR2 109 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 FABP4P15090 132 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 SLC25A16P16260 332 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 IER3P46695 156 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 WDR73Q6P4I2 378 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 TMEM219Q86XT9 240 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 CMTM2Q8TAZ6 248 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 MRPL18Q9H0U6 180 aaKnown RBP12.39□□□□□ -0.43
USH1C-204ENST00000526313 SERTAD4Q9NUC0 356 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 RPH3ALQ9UNE2 315 aa12.39□□□□□ -0.43
USH1C-204ENST00000526313 LINC00587B1AMM8 73 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 AMBPP02760 352 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 MT-ND6P03923 174 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 LINC00322Q6ZN03 302 aaPredicted RBP12.38□□□□□ -0.43
USH1C-204ENST00000526313 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 Q86TA4 180 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 ATP6V0BQ99437 205 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 A0A096LNT2 108 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 CA1P00915 261 aaPredicted RBP12.38□□□□□ -0.43
USH1C-204ENST00000526313 COX6B1P14854 86 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 GATA3P23771 443 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 CT83Q5H943 113 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 RASL11AQ6T310 242 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 TMEM75Q8N9X5 138 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 WIPF2Q8TF74 440 aaPredicted RBP12.38□□□□□ -0.43
USH1C-204ENST00000526313 TSKUQ8WUA8 353 aa12.38□□□□□ -0.43
USH1C-204ENST00000526313 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 A6NDX4 124 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 CLEC3BP05452 202 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 RPL7P18124 248 aaKnown RBP12.37□□□□□ -0.43
USH1C-204ENST00000526313 TCL1AP56279 114 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 GOLT1AQ6ZVE7 132 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 ARL6IP6Q8N6S5 226 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 PACRGQ96M98 296 aaPredicted RBP12.37□□□□□ -0.43
USH1C-204ENST00000526313 CCDC140Q96MF4 163 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 ZFAND3Q9H8U3 227 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 SNURFLB1AK76 121 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 BRI3O95415 125 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 DNLZQ5SXM8 178 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 TOMM20LQ6UXN7 152 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 HIF1ANQ9NWT6 349 aa12.37□□□□□ -0.43
USH1C-204ENST00000526313 SOX21Q9Y651 276 aaPredicted RBP12.37□□□□□ -0.43
USH1C-204ENST00000526313 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 TRBV7-1A0A0A6YYK4 115 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 TRAV41A0A0B4J266 112 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 NPIPB6E9PJ23 425 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 AVPP01185 164 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 IGF1P05019 195 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 S100A7P31151 101 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 GPR183P32249 361 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 PRR27Q6MZM9 219 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 NUP35Q8NFH5 326 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 NAT8BQ9UHF3 227 aa12.36□□□□□ -0.43
USH1C-204ENST00000526313 UTP20O75691 2785 aaKnown RBP12.36□□□□□ -0.43
USH1C-204ENST00000526313 ZNF785A8K8V0 405 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 DIRC3C9JPN6 131 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 BMPR1BO00238 502 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 C16orf54Q6UWD8 224 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 GBGT1Q8N5D6 347 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 EEF1AKMT3Q96AZ1 226 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 ZFP30Q9Y2G7 519 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 SMAD5-AS1Q9Y6J3 95 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 ZNF253O75346 499 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 PSG9Q00887 426 aa12.35□□□□□ -0.43
USH1C-204ENST00000526313 RPP21Q9H633 154 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms