RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PEG3Q9GZU2 1588 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 RTL9Q8NET4 1388 aa2.61□□□□□ -1.99
USP47-206ENST00000525367 NYNRINQ9P2P1 1898 aaKnown RBP2.6□□□□□ -1.99
USP47-206ENST00000525367 SEC16AO15027 2179 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 IGLV3-9A0A075B6K5 115 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 A0A096LPI6 279 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 MT-ND4LP03901 98 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 MGST1P10620 155 aaKnown RBP2.6□□□□□ -1.99
USP47-206ENST00000525367 PEBP1P30086 187 aaKnown RBP2.6□□□□□ -1.99
USP47-206ENST00000525367 LSM3P62310 102 aaKnown RBP2.6□□□□□ -1.99
USP47-206ENST00000525367 MRPS36P82909 103 aaKnown RBP2.6□□□□□ -1.99
USP47-206ENST00000525367 Q5XG85 94 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 PATE2Q6UY27 113 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 ZNF826PQ6ZT77 177 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 C7orf65Q6ZTY9 151 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 MMGT1Q8N4V1 131 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 FAM216BQ8N7L0 139 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 OR5AC2Q9NZP5 309 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 PRO2289Q9P1D8 64 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 MYH11P35749 1972 aa2.6□□□□□ -1.99
USP47-206ENST00000525367 PLXNB1O43157 2135 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 IGKV1D-42A0A075B6H8 117 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 C17orf112F2Z3M2 114 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 LYRM1O43325 122 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 SMIM24O75264 130 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 PGLYRP1O75594 196 aaPredicted RBP2.59□□□□□ -1.99
USP47-206ENST00000525367 CRYGSP22914 178 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 LINC00301Q8NCQ3 95 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 NAT14Q8WUY8 206 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 C14orf132Q9NPU4 83 aa2.59□□□□□ -1.99
USP47-206ENST00000525367 TRAV3A0A0B4J244 114 aa2.58□□□□□ -2
USP47-206ENST00000525367 RNASE2P10153 161 aaKnown RBP2.58□□□□□ -2
USP47-206ENST00000525367 TPT1P13693 172 aaKnown RBP2.58□□□□□ -2
USP47-206ENST00000525367 RAB5CP51148 216 aa2.58□□□□□ -2
USP47-206ENST00000525367 OR2T35Q8NGX2 323 aa2.58□□□□□ -2
USP47-206ENST00000525367 CGREF1Q99674 301 aa2.58□□□□□ -2
USP47-206ENST00000525367 RETNLBQ9BQ08 111 aa2.58□□□□□ -2
USP47-206ENST00000525367 SLC50A1Q9BRV3 221 aa2.58□□□□□ -2
USP47-206ENST00000525367 CXCL16Q9H2A7 254 aa2.58□□□□□ -2
USP47-206ENST00000525367 IBA57-AS1B1ANH7 110 aa2.57□□□□□ -2
USP47-206ENST00000525367 UBL3O95164 117 aa2.57□□□□□ -2
USP47-206ENST00000525367 CDK5R1Q15078 307 aa2.57□□□□□ -2
USP47-206ENST00000525367 TAF9Q16594 264 aa2.57□□□□□ -2
USP47-206ENST00000525367 HSD17B12Q53GQ0 312 aa2.57□□□□□ -2
USP47-206ENST00000525367 TMEM14EPQ6UXP3 125 aa2.57□□□□□ -2
USP47-206ENST00000525367 LINC00304Q8N9R0 145 aa2.57□□□□□ -2
USP47-206ENST00000525367 MORN4Q8NDC4 146 aa2.57□□□□□ -2
USP47-206ENST00000525367 DIRC1Q969H9 104 aa2.57□□□□□ -2
USP47-206ENST00000525367 CST9LQ9H4G1 147 aa2.57□□□□□ -2
USP47-206ENST00000525367 DENND4CQ5VZ89 1909 aa2.57□□□□□ -2
USP47-206ENST00000525367 DOCK4Q8N1I0 1966 aa2.57□□□□□ -2
USP47-206ENST00000525367 DSPPQ9NZW4 1301 aa2.57□□□□□ -2
USP47-206ENST00000525367 OVOS2A0A0J9YW53 1432 aa2.57□□□□□ -2
USP47-206ENST00000525367 OVOS2Q6IE36 1432 aa2.57□□□□□ -2
USP47-206ENST00000525367 SLIT2O94813 1529 aa2.57□□□□□ -2
USP47-206ENST00000525367 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.56□□□□□ -2
USP47-206ENST00000525367 TRAV1-1A0A0B4J248 108 aa2.56□□□□□ -2
USP47-206ENST00000525367 CCDC160A6NGH7 325 aa2.56□□□□□ -2
USP47-206ENST00000525367 OR2T8A6NH00 312 aa2.56□□□□□ -2
USP47-206ENST00000525367 LY6LH3BQJ8 138 aa2.56□□□□□ -2
USP47-206ENST00000525367 K7ERU9 68 aa2.56□□□□□ -2
USP47-206ENST00000525367 UQCRQO14949 82 aa2.56□□□□□ -2
USP47-206ENST00000525367 OR1I1O60431 355 aa2.56□□□□□ -2
USP47-206ENST00000525367 FOXA3P55318 350 aaPredicted RBP2.56□□□□□ -2
USP47-206ENST00000525367 DNAJB13P59910 316 aa2.56□□□□□ -2
USP47-206ENST00000525367 MAXP61244 160 aa2.56□□□□□ -2
USP47-206ENST00000525367 NCS1P62166 190 aa2.56□□□□□ -2
USP47-206ENST00000525367 HES1Q14469 280 aa2.56□□□□□ -2
USP47-206ENST00000525367 SS18Q15532 418 aa2.56□□□□□ -2
USP47-206ENST00000525367 TMEM155Q4W5P6 130 aa2.56□□□□□ -2
USP47-206ENST00000525367 Q8IYB0 196 aa2.56□□□□□ -2
USP47-206ENST00000525367 TP53RKQ96S44 253 aa2.56□□□□□ -2
USP47-206ENST00000525367 BANF2Q9H503 90 aa2.56□□□□□ -2
USP47-206ENST00000525367 DISP2A7MBM2 1401 aa2.56□□□□□ -2
USP47-206ENST00000525367 KDM5BQ9UGL1 1544 aa2.56□□□□□ -2
USP47-206ENST00000525367 COL4A4P53420 1690 aaPredicted RBP2.56□□□□□ -2
USP47-206ENST00000525367 ARHGEF28Q8N1W1 1705 aaKnown RBP2.56□□□□□ -2
USP47-206ENST00000525367 SLX4Q8IY92 1834 aa2.56□□□□□ -2
USP47-206ENST00000525367 PTPRSQ13332 1948 aa2.56□□□□□ -2
USP47-206ENST00000525367 MEIKINA0A087WXM9 373 aa2.55□□□□□ -2
USP47-206ENST00000525367 ZNF705FA8MVS1 300 aaPredicted RBP2.55□□□□□ -2
USP47-206ENST00000525367 IGKV1-17P01599 117 aa2.55□□□□□ -2
USP47-206ENST00000525367 MIFP14174 115 aa2.55□□□□□ -2
USP47-206ENST00000525367 SELENOWP63302 87 aa2.55□□□□□ -2
USP47-206ENST00000525367 CACNA1DQ01668 2161 aa2.55□□□□□ -2
USP47-206ENST00000525367 RFX7Q2KHR2 1363 aa2.55□□□□□ -2
USP47-206ENST00000525367 RNASE10Q5GAN6 216 aaKnown RBP2.55□□□□□ -2
USP47-206ENST00000525367 GLYATL3Q5SZD4 288 aa2.55□□□□□ -2
USP47-206ENST00000525367 UBR2Q8IWV8 1755 aa2.55□□□□□ -2
USP47-206ENST00000525367 POP5Q969H6 163 aaKnown RBP2.55□□□□□ -2
USP47-206ENST00000525367 TRPM6Q9BX84 2022 aa2.55□□□□□ -2
USP47-206ENST00000525367 ERG28Q9UKR5 140 aa2.55□□□□□ -2
USP47-206ENST00000525367 TPRKBQ9Y3C4 175 aa2.55□□□□□ -2
USP47-206ENST00000525367 LHFPL6Q9Y693 200 aa2.55□□□□□ -2
USP47-206ENST00000525367 OBSL1O75147 1896 aa2.54□□□□□ -2
USP47-206ENST00000525367 WDR7Q9Y4E6 1490 aa2.54□□□□□ -2
USP47-206ENST00000525367 IGKV1D-17A0A075B6S4 117 aa2.54□□□□□ -2
USP47-206ENST00000525367 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
USP47-206ENST00000525367 SDHAF1A6NFY7 115 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms