RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 LITAFQ99732 161 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 CHCHD7Q9BUK0 85 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 BANF2Q9H503 90 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 RPP21Q9H633 154 aaKnown RBP3.14□□□□□ -1.91
CD44-213ENST00000525209 IL36BQ9NZH7 164 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 CCDC167Q9P0B6 97 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 METTL1Q9UBP6 276 aaKnown RBP3.14□□□□□ -1.91
CD44-213ENST00000525209 MARCOQ9UEW3 520 aaPredicted RBP3.14□□□□□ -1.91
CD44-213ENST00000525209 ATG2BQ96BY7 2078 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 COL2A1P02458 1487 aaPredicted RBP3.14□□□□□ -1.91
CD44-213ENST00000525209 TTC28Q96AY4 2481 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 COL4A4P53420 1690 aaPredicted RBP3.14□□□□□ -1.91
CD44-213ENST00000525209 SCN2AQ99250 2005 aa3.14□□□□□ -1.91
CD44-213ENST00000525209 DSCAML1Q8TD84 2053 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 MYH6P13533 1939 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 IGLV11-55A0A075B6I3 123 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 TRAV13-1A0A0B4J241 112 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 FAM236AA0A1B0GUQ0 79 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 FAM236BA0A1B0GV22 79 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 BBIP1A8MTZ0 92 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 ZNF727A8MUV8 499 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 KRASP01116 189 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 IGLV3-25P01717 112 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 IGHV1-8P0DP01 117 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 CRHBPP24387 322 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 S100A4P26447 101 aaKnown RBP3.13□□□□□ -1.91
CD44-213ENST00000525209 LYZP61626 148 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 RPL30P62888 115 aaKnown RBP3.13□□□□□ -1.91
CD44-213ENST00000525209 BTG2P78543 158 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 QRFPP83859 136 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 HSD52Q0P140 79 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 DIAPH2-AS1Q14236 149 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 LINC01554Q52M75 96 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 PABPC1L2AQ5JQF8 200 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 MEIG1Q5JSS6 88 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 ZNF880Q6PDB4 577 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 LCN15Q6UWW0 184 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 PHF5AQ7RTV0 110 aaKnown RBP3.13□□□□□ -1.91
CD44-213ENST00000525209 TEX29Q8N6K0 151 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 SUMF2Q8NBJ7 301 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 LINC01006Q8NI28 216 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 ADAT1Q9BUB4 502 aaKnown RBP3.13□□□□□ -1.91
CD44-213ENST00000525209 RERGLQ9H628 205 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 ZNF556Q9HAH1 456 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 SCP2D1Q9UJQ7 156 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 ZNF835Q9Y2P0 537 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 SIP14410 1827 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 KIAA1671Q9BY89 1806 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 PIKFYVEQ9Y2I7 2098 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 TICRRQ7Z2Z1 1910 aa3.13□□□□□ -1.91
CD44-213ENST00000525209 PTPRZ1P23471 2315 aaPredicted RBP3.13□□□□□ -1.91
CD44-213ENST00000525209 ZNF638Q14966 1978 aaKnown RBP3.12□□□□□ -1.91
CD44-213ENST00000525209 MYO7AQ13402 2215 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 TRAV27A0A087WT01 109 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 IGHV3-49A0A0A0MS15 119 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 IGKV1-9A0A0C4DH69 117 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 A0A1W2PPR1 153 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 LEUTXA8MZ59 168 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 H3BMG7 143 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 CCDC179H3BU77 68 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 UBFD1O14562 309 aaKnown RBP3.12□□□□□ -1.91
CD44-213ENST00000525209 APCSP02743 223 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 CXCL1P09341 107 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 P0C879 139 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 BRS3P32247 399 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 SRP14P37108 136 aaKnown RBP3.12□□□□□ -1.91
CD44-213ENST00000525209 CSN1S1P47710 185 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 UBE2BP63146 152 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 ZNF678Q5SXM1 525 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 RPS19BP1Q86WX3 136 aaKnown RBP3.12□□□□□ -1.91
CD44-213ENST00000525209 GKN2Q86XP6 184 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 C15orf56Q8N910 161 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 KLHL30-AS1Q8NEE0 82 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 TET1Q8NFU7 2136 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 SNRNP25Q9BV90 132 aaKnown RBP3.12□□□□□ -1.91
CD44-213ENST00000525209 PLA2G12AQ9BZM1 189 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 CELA1Q9UNI1 258 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 MPC1Q9Y5U8 109 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 NCKAP5O14513 1909 aa3.12□□□□□ -1.91
CD44-213ENST00000525209 TRBV27A0A0K0K1C4 114 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 C7orf71A4D174 169 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 OR2T8A6NH00 312 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 A8MWV9 139 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 C19orf84I3L1E1 186 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 CFC1BP0CG36 223 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 CGB3P0DN86 165 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 CGB7P0DN87 165 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 CRYBB3P26998 211 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 DYNLT3P51808 116 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 YPEL3P61236 119 aaPredicted RBP3.11□□□□□ -1.91
CD44-213ENST00000525209 EIF5AP63241 154 aaKnown RBP3.11□□□□□ -1.91
CD44-213ENST00000525209 HBBP68871 147 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 DEFB103AP81534 67 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 HES1Q14469 280 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 FAM78AQ5JUQ0 283 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 FAM104BQ5XKR9 115 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 C22orf39Q6P5X5 142 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 AMTNQ6UX39 209 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 CEND1Q8N111 149 aa3.11□□□□□ -1.91
CD44-213ENST00000525209 OR10G2Q8NGC3 310 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms