RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 DISP1Q96F81 1524 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 OVOS2A0A0J9YW53 1432 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 OVOS2Q6IE36 1432 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 IGKV2D-24A0A075B6R9 120 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 TRAV7A0A075B6U4 112 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 A0A0D9SG52 128 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 TRBV7-6A0A0J9YX20 115 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 H3BMG7 143 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 GNRH2O43555 120 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 SYNGR2O43760 224 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 GNG7O60262 68 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 MT-ND6P03923 174 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 IFNA4P05014 189 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 HLA-EP13747 358 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 RAB5CP51148 216 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 Q5XG85 94 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 SOSTDC1Q6X4U4 206 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 TMEM136Q6ZRR5 245 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 SLC35E3Q7Z769 313 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 TMEM203Q969S6 136 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 HS3ST2Q9Y278 367 aa3.3□□□□□ -1.88
USP47-204ENST00000525078 COL27A1Q8IZC6 1860 aaPredicted RBP3.3□□□□□ -1.88
USP47-204ENST00000525078 ZNF407Q9C0G0 2248 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 FRMPD1Q5SYB0 1578 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 ZNF646O15015 1829 aaPredicted RBP3.29□□□□□ -1.88
USP47-204ENST00000525078 UQCRHLA0A096LP55 91 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 C7orf71A4D174 169 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 FAM25AB3EWG3 89 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 FAM25CB3EWG5 89 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 FAM25GB3EWG6 89 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 ATP6V1G2-DDX39BF2Z307 99 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 RPL36A-HNRNPH2H7BZ11 118 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 UQCRHP07919 91 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 DEFA4P12838 97 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
USP47-204ENST00000525078 RPS25P62851 125 aaKnown RBP3.29□□□□□ -1.88
USP47-204ENST00000525078 SELENOWP63302 87 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 GLYATL3Q5SZD4 288 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 Q6P435 159 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 LYZL1Q6UWQ5 148 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 PHF5AQ7RTV0 110 aaKnown RBP3.29□□□□□ -1.88
USP47-204ENST00000525078 DYNAPQ8N1N2 210 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 OR4E2Q8NGC2 313 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 OR5H6Q8NGV6 325 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 OR4K15Q8NH41 348 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 MAGOHBQ96A72 148 aaKnown RBP3.29□□□□□ -1.88
USP47-204ENST00000525078 HIGD2AQ9BW72 106 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 TET3O43151 1660 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 SAMD9LQ8IVG5 1584 aa3.29□□□□□ -1.88
USP47-204ENST00000525078 PPIP5K1Q6PFW1 1433 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 IGLV4-60A0A075B6I1 120 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 FAM92AA1XBS5 289 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 H7C2G1 150 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 RER1O15258 196 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 PSCAO43653 123 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 KDELR1P24390 212 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 DYNLT1P63172 113 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 FOXF1Q12946 379 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 HES1Q14469 280 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 MMGT1Q8N4V1 131 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 OR4S1Q8NGB4 309 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 MARCOQ9UEW3 520 aaPredicted RBP3.28□□□□□ -1.88
USP47-204ENST00000525078 TNFSF18Q9UNG2 199 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 FAM215AQ9Y5M1 114 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 MAP3K4Q9Y6R4 1608 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 MYH7BA7E2Y1 1941 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 VWDEQ8N2E2 1590 aa3.28□□□□□ -1.88
USP47-204ENST00000525078 N4BP2Q86UW6 1770 aaPredicted RBP3.28□□□□□ -1.89
USP47-204ENST00000525078 ANKRD36BQ8N2N9 1353 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 COLCA2A8K830 154 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 ZNF14P17017 642 aaPredicted RBP3.27□□□□□ -1.89
USP47-204ENST00000525078 RPL22P35268 128 aaKnown RBP3.27□□□□□ -1.89
USP47-204ENST00000525078 COPZ1P61923 177 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 RELAQ04206 551 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 AMMECR1LQ6DCA0 310 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 TMEM14EPQ6UXP3 125 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 CTAGE3PQ8IX95 158 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 PRELID3AQ96N28 172 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 GGACTQ9BVM4 153 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 LINC00470Q9BZP3 86 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 BANF2Q9H503 90 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 HHLA3Q9XRX5 114 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 EFCAB6Q5THR3 1501 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 NRXN1Q9ULB1 1477 aa3.27□□□□□ -1.89
USP47-204ENST00000525078 PLXNB1O43157 2135 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 DSPPQ9NZW4 1301 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 TRBV10-2A0A0K0K1G8 114 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 SDCBPO00560 298 aaPredicted RBP3.26□□□□□ -1.89
USP47-204ENST00000525078 IFNGP01579 166 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 CRYGAP11844 174 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 FXYD2P54710 66 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 EBI3Q14213 229 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 HSD17B12Q53GQ0 312 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 PABPC1L2AQ5JQF8 200 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 FAM27BQ5VT28 67 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 OR5A2Q8NGI9 324 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 AQP3Q92482 292 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 C12orf57Q99622 126 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 GNG8Q9UK08 70 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms