RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 Q9H3A6 140 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 LPAR2Q9HBW0 351 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 MRPL27Q9P0M9 148 aaKnown RBP10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 RPH3ALQ9UNE2 315 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 GOSR1O95249 250 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 HIST1H1EP10412 219 aaKnown RBP10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 MFAP4P55083 255 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 TMEM68Q96MH6 324 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 ZNF48Q96MX3 618 aaPredicted RBP10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 C20orf144Q9BQM9 153 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 C7orf69Q9H7B7 122 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 ZNF586Q9NXT0 402 aa10.85□□□□□ -0.67
LDLRAD3-202ENST00000524419 GNG7O60262 68 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 ZNF253O75346 499 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 CA1P00915 261 aaPredicted RBP10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 SRIP30626 198 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 KIAA1644Q3SXP7 199 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 RNF125Q96EQ8 232 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 SHANK2-AS3Q9BTD1 123 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 THYN1Q9P016 225 aa10.84□□□□□ -0.67
LDLRAD3-202ENST00000524419 H3BRN7 92 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 H3BTX0 84 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 CD33P20138 364 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 SAA4P35542 130 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 S100A7AQ86SG5 101 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 MRPL52Q86TS9 123 aaKnown RBP10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 TSKUQ8WUA8 353 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 TMEM190Q8WZ59 177 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 FMC1Q96HJ9 113 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 GPR82Q96P67 336 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 ABCA1O95477 2261 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 ZNF462Q96JM2 2506 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 A0A1W2PS18 150 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 HLA-DRB1P01911 266 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 IL4P05112 153 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 Q56UQ5 140 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 FAM120AOSQ5T036 256 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 Q8N9W7 124 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 NUP35Q8NFH5 326 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 CCL19Q99731 98 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 PIMREGQ9BSJ6 248 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 RNF24Q9Y225 148 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 S4R3C0 116 aa10.83□□□□□ -0.68
LDLRAD3-202ENST00000524419 IGHV7-81A0A0B4J1V7 117 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 WI2-2373I1.2A0A1W2PRP0 233 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 M0R143 59 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 NPFFO15130 113 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 SCGB2A1O75556 95 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 TCRAP04437 139 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 BPIFA4PQ86YQ2 179 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 ZNF491Q8N8L2 437 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 OR4F17Q8NGA8 305 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 NRN1Q9NPD7 142 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 C21orf62Q9NYP8 219 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 FBXL7Q9UJT9 491 aa10.82□□□□□ -0.68
LDLRAD3-202ENST00000524419 EREGO14944 169 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 ZNF324O75467 553 aaPredicted RBP10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 AMTP48728 403 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 PRR27Q6MZM9 219 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 VN1R17PQ8TDU5 208 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 RCHY1Q96PM5 261 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 VAMP8Q9BV40 100 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 MLST8Q9BVC4 326 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 SNHG12Q9BXW3 62 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 CFAP46Q8IYW2 2715 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 OR2J3O76001 311 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 RNF224P0DH78 156 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 RAB4AP20338 218 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 SLAQ13239 276 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 KLF5Q13887 457 aaPredicted RBP10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 CT83Q5H943 113 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 NEU1Q99519 415 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 MIEN1Q9BRT3 115 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 ZNF492Q9P255 531 aa10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 FLNBO75369 2602 aaKnown RBP10.81□□□□□ -0.68
LDLRAD3-202ENST00000524419 NDUFB8O95169 186 aa10.8□□□□□ -0.68
LDLRAD3-202ENST00000524419 LTAP01374 205 aa10.8□□□□□ -0.68
LDLRAD3-202ENST00000524419 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
LDLRAD3-202ENST00000524419 KRTDAPP60985 99 aa10.8□□□□□ -0.68
LDLRAD3-202ENST00000524419 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
LDLRAD3-202ENST00000524419 AKAP6Q13023 2319 aa10.8□□□□□ -0.68
LDLRAD3-202ENST00000524419 TRBV19A0A075B6N1 114 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 HIGD1CA8MV81 97 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 DIRC3C9JPN6 131 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 M0QZK8 103 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 TDRG1Q3Y452 100 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 Q8N976 141 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 OR4B1Q8NGF8 309 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 FAM110DQ8TAY7 271 aaPredicted RBP10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 C18orf32Q8TCD1 76 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 SGK494Q96LW2 274 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 PRSS22Q9GZN4 317 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 SOX21Q9Y651 276 aaPredicted RBP10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 A0A1B0GXF2 115 aa10.79□□□□□ -0.68
LDLRAD3-202ENST00000524419 F8W735 103 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms