RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	OR2A5	Q96R48	311 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	THTPA	Q9BU02	230 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	CCDC32	Q9BV29	185 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	CHST6	Q9GZX3	395 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	MED28	Q9H204	178 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	TAC3	Q9UHF0	121 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	NUFIP1	Q9UHK0	495 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	HSPE1-MOB4	S4R3N1	261 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	FREM3	P0C091	2139 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	CR1	P17927	2039 aa		2.92	□□□□□ -1.94
PCM1-223	ENST00000524356	MALRD1	Q5VYJ5	2156 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356		A0A087WX48	190 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356		A0A096LNT2	108 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	IGKV1-6	A0A0C4DH72	117 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	IGHV1-69-2	A0A0G2JMI3	117 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356		B4DEV8	164 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356		M0R381	172 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	DEGS1	O15121	323 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	SOCS1	O15524	211 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	RGS5	O15539	181 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	ZNF682	O95780	498 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	IGKV1-39	P01597	117 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	IGKV1D-39	P04432	117 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	SEC11B	P0C7V7	166 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	TRAPPC2	P0DI81	140 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	TRAPPC2B	P0DI82	140 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	ZNF83	P51522	516 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	ZNF140	P52738	457 aa	Predicted RBP	2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	LINC00313	P59037	77 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	RPS28	P62857	69 aa	Known RBP	2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	PLPPR5	Q32ZL2	321 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	HSD17B12	Q53GQ0	312 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	RNASE10	Q5GAN6	216 aa	Known RBP	2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	LAIR2	Q6ISS4	152 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	LINC00299	Q6ZSB3	139 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	LRP11	Q86VZ4	500 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	C14orf178	Q8N769	122 aa	Predicted RBP	2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	ZDHHC22	Q8N966	263 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	MBD3L1	Q8WWY6	194 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	PLEKHB2	Q96CS7	222 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	MS4A6E	Q96DS6	147 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	MALSU1	Q96EH3	234 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	C16orf74	Q96GX8	76 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	REEP6	Q96HR9	211 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	CCDC115	Q96NT0	180 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	GPR82	Q96P67	336 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	NMNAT3	Q96T66	252 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	HDHD3	Q9BSH5	251 aa	Predicted RBP	2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	REG4	Q9BYZ8	158 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	PROK2	Q9HC23	129 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	RPS6KB2	Q9UBS0	482 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	NIN	Q8N4C6	2090 aa		2.91	□□□□□ -1.94
PCM1-223	ENST00000524356	BORCS7-ASMT	A0A0B4J1R7	106 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	ZNF860	A6NHJ4	632 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356		I3L521	148 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	CHST10	O43529	356 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	FSTL3	O95633	263 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	LTA	P01374	205 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	IL1RN	P18510	177 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	KDELR1	P24390	212 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	UBE2A	P49459	152 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	EMP1	P54849	157 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	TNFAIP6	P98066	277 aa	Predicted RBP	2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	PABPC1L2A	Q5JQF8	200 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	AGTRAP	Q6RW13	159 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	LRRC28	Q86X40	367 aa	Predicted RBP	2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	SGPP2	Q8IWX5	399 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	ZNF664	Q8N3J9	261 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	APCDD1L	Q8NCL9	501 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	PLPP5	Q8NEB5	264 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	TMEM203	Q969S6	136 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	GNPNAT1	Q96EK6	184 aa	Predicted RBP	2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	VGLL1	Q99990	258 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	PDCD10	Q9BUL8	212 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	TTTY12	Q9BZ98	90 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	COMMD5	Q9GZQ3	224 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	PBOV1	Q9GZY1	135 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	TMEM126A	Q9H061	195 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	CXorf21	Q9HAI6	301 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	C8orf17	Q9NRJ1	99 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	TAAR3P	Q9P1P4	343 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	COPZ2	Q9P299	210 aa		2.9	□□□□□ -1.95
PCM1-223	ENST00000524356	HEATR5B	Q9P2D3	2071 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356		A0A0J9YWU9	116 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356		A0A1B0GVX0	72 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	GSTZ1	O43708	216 aa	Predicted RBP	2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	OR7C2	O60412	319 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	PIAS1	O75925	651 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	OPN1SW	P03999	348 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	MAS1	P04201	325 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	GYPC	P04921	128 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	CSN2	P05814	226 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	METTL15P1	P0C7V9	234 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	CCL3	P10147	92 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	ZNF25	P17030	456 aa	Predicted RBP	2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	PPIB	P23284	216 aa	Known RBP	2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	G6PC	P35575	357 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	CD200	P41217	278 aa		2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	CMC4	P56277	68 aa	Predicted RBP	2.89	□□□□□ -1.95
PCM1-223	ENST00000524356	DNAJB13	P59910	316 aa		2.89	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms