RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 GDF5OSQ5U4N7 250 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 FAM78BQ5VT40 261 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 MZT2BQ6NZ67 158 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 TMEM144Q7Z5S9 345 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 FAM210BQ96KR6 192 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 RSG1Q9BU20 258 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 C20orf85Q9H1P6 137 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 PSENENQ9NZ42 101 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 MGAT4CQ9UBM8 478 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 HIGD1AQ9Y241 93 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 FRAS1Q86XX4 4008 aa6.38□□□□□ -1.39
CTNNA1-240ENST00000523912 PRSS46E5RG02 174 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 HYPMO75409 117 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 ADAP1O75689 374 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 SCGB1D2O95969 90 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 INSP01308 110 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 OR4E1P0C645 316 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 LINC00869P0C866 280 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 POLR2GP62487 172 aaKnown RBP eCLIP6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 DLK1P80370 383 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 PRR20EP86478 221 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 PRR20CP86479 221 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 PRR20DP86480 221 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 PRR20BP86481 221 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 PRR20AP86496 221 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 IFITM3Q01628 133 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 ID3Q02535 119 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 RRN3P1Q2M238 152 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 CYP2G1PQ6ZSU1 146 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 ZNF767PQ75MW2 155 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 ZNF709Q8N972 641 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 ENKURQ8TC29 256 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 SLC35B3Q9H1N7 401 aa6.37□□□□□ -1.39
CTNNA1-240ENST00000523912 HECTD4Q9Y4D8 3996 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 LOC102723971A0A1B0GUV8 181 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 FAM240BA0A1B0GVZ2 78 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 FNDC10F2Z333 226 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 F6UB75 175 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 H3BRN7 92 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 OR5G3P0C626 314 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 DEFB1P60022 68 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 B2MP61769 119 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 FGL1Q08830 312 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 IAH1Q2TAA2 248 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 LINC00336Q6ZUF6 198 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 ZNF546Q86UE3 836 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 UBE2DNLQ8IWF7 75 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 ZNF738Q8NE65 137 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 OR10P1Q8NGE3 313 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 LRRC20Q8TCA0 184 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 SMIM8Q96KF7 97 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 NIPSNAP3BQ9BS92 247 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 SHANK2-AS3Q9BTD1 123 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 SCRT1Q9BWW7 348 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 SLC25A39Q9BZJ4 359 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 NUDT15Q9NV35 164 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 PPP1R14DQ9NXH3 145 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 HERC2O95714 4834 aa6.36□□□□□ -1.39
CTNNA1-240ENST00000523912 L7N2F9 121 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 TSC22D2O75157 780 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 PTTG1O95997 202 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 TCRBP04435 133 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 ANXA7P20073 488 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 GATA2P23769 480 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 CNN1P51911 297 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 TAS2R30P59541 319 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 RRAS2P62070 204 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 VAMP2P63027 116 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 OXA1LQ15070 435 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 PXDC1Q5TGL8 231 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 FAM222AQ5U5X8 452 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 TEPPQ6URK8 271 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 POM121L12Q8N7R1 296 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 C20orf173Q96LM9 149 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 IGF2BP2-AS1Q96M15 143 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 GSKIPQ9P0R6 139 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 DKK2Q9UBU2 259 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 FLVCR2Q9UPI3 526 aa6.35□□□□□ -1.39
CTNNA1-240ENST00000523912 TRAV6A0A075B6T7 132 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 BOLA2-SMG1P6H3BVE0 249 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 GOSR2O14653 212 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 METTL15P1P0C7V9 234 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 HTN3P15516 51 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 CXCL2P19875 107 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 PLP1P60201 277 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 DAD1P61803 113 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 HIST1H1AQ02539 215 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 RAB31Q13636 194 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 TMEM14EPQ6UXP3 125 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 NRARPQ7Z6K4 114 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 ZBTB8BQ8NAP8 495 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 MITD1Q8WV92 249 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 GGACTQ9BVM4 153 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 NPVFQ9HCQ7 196 aa6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 YTHDF2Q9Y5A9 579 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-240ENST00000523912 A0A087X0K7 114 aa6.33□□□□□ -1.4
CTNNA1-240ENST00000523912 LYRM9A8MSI8 78 aa6.33□□□□□ -1.4
CTNNA1-240ENST00000523912 A8MTW9 85 aa6.33□□□□□ -1.4
CTNNA1-240ENST00000523912 FAM25EA8MYX2 175 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms