RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 KLF5Q13887 457 aaPredicted RBP9.98□□□□□ -0.81
CPNE3-205ENST00000522240 C1orf194Q5T5A4 169 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 PCNPQ8WW12 178 aaKnown RBP9.98□□□□□ -0.81
CPNE3-205ENST00000522240 RAX2Q96IS3 184 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 CITED1Q99966 193 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 C20orf24Q9BUV8 137 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 SCRT1Q9BWW7 348 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 SLC25A2Q9BXI2 301 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 MED9Q9NWA0 146 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 U3KQE9 123 aa9.98□□□□□ -0.81
CPNE3-205ENST00000522240 A0A1W2PRX2 142 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 CCL24O00175 119 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 GP9P14770 177 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 BMI1P35226 326 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 PSMB3P49720 205 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 PPT1P50897 306 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 IL34Q6ZMJ4 242 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 GPR82Q96P67 336 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 HRH4Q9H3N8 390 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 TMEM231Q9H6L2 316 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 TMEM14CQ9P0S9 112 aa9.97□□□□□ -0.81
CPNE3-205ENST00000522240 MGAM2Q2M2H8 2515 aa9.96□□□□□ -0.81
CPNE3-205ENST00000522240 IGHV3OR16-8A0A075B7F1 116 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 IGHV7-4-1A0A0J9YVY3 117 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 A0A1W2PS18 150 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 ZNF320A2RRD8 509 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 TMEM213A2RRL7 107 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 LINC00862A6NCI5 91 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 HMGB3O15347 200 aaKnown RBP9.96□□□□□ -0.82
CPNE3-205ENST00000522240 BUB3O43684 328 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 OR7C2O60412 319 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 RPL7P18124 248 aaKnown RBP9.96□□□□□ -0.82
CPNE3-205ENST00000522240 GCHFRP30047 84 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 MYCNOSP40205 109 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 SLURP1P55000 103 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 FGF8P55075 233 aaPredicted RBP9.96□□□□□ -0.82
CPNE3-205ENST00000522240 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 PMS2P11Q13670 270 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 BPIFA4PQ86YQ2 179 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 MARC2Q969Z3 335 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 ZNF503Q96F45 646 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 PAXXQ9BUH6 204 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 PEMTQ9UBM1 199 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 ARL2-SNX15V9GYD0 113 aa9.96□□□□□ -0.82
CPNE3-205ENST00000522240 TRAV5A0A0B4J249 113 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 EIF3GO75821 320 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPNE3-205ENST00000522240 IFNA1P01562 189 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 UBE2L3P68036 154 aaKnown RBP9.95□□□□□ -0.82
CPNE3-205ENST00000522240 NDUFA5Q16718 116 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 NSUN5P1Q3KNT7 163 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 LEMD1Q68G75 181 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 HIST2H2BDQ6DRA6 164 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 SUN5Q8TC36 379 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 GRAMD2BQ96HH9 432 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 ELOVL1Q9BW60 279 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 OR51M1Q9H341 326 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 MANBALQ9NQG1 85 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 TENM1Q9UKZ4 2725 aa9.95□□□□□ -0.82
CPNE3-205ENST00000522240 A0A1B0GV50 99 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 MRPS12O15235 138 aaKnown RBP9.94□□□□□ -0.82
CPNE3-205ENST00000522240 ZNF207O43670 478 aaKnown RBP9.94□□□□□ -0.82
CPNE3-205ENST00000522240 TAGLN2P37802 199 aaKnown RBP9.94□□□□□ -0.82
CPNE3-205ENST00000522240 C16orf54Q6UWD8 224 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 OR4F17Q8NGA8 305 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 OR9G4Q8NGQ1 327 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 GLMPQ8WWB7 406 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 DUX3Q96PT4 197 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 OR4F4Q96R69 305 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 ZNF747Q9BV97 191 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 SMPXQ9UHP9 88 aa9.94□□□□□ -0.82
CPNE3-205ENST00000522240 RAB19A4D1S5 217 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 C2orf70A6NJV1 201 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 IGLC2P0DOY2 106 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 PYYP10082 97 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 HIST1H1EP10412 219 aaKnown RBP9.93□□□□□ -0.82
CPNE3-205ENST00000522240 GALR1P47211 349 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 TM4SF20Q53R12 229 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 IQCF2Q8IXL9 164 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 OR8I2Q8N0Y5 310 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
CPNE3-205ENST00000522240 FXYD5Q96DB9 178 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 FAM210AQ96ND0 272 aa9.93□□□□□ -0.82
CPNE3-205ENST00000522240 A0A087X0K7 114 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 M0QZ24 198 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 CHEK1O14757 476 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 APOHP02749 345 aaPredicted RBP9.92□□□□□ -0.82
CPNE3-205ENST00000522240 OR10J4P0C629 311 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 BCL2P10415 239 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 MEOX2P50222 304 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 CCL20P78556 96 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 PDE6HQ13956 83 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 GUK1Q16774 197 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 RHPN1-AS1Q9BWJ2 59 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 TMPRSS5Q9H3S3 457 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 GNG13Q9P2W3 67 aa9.92□□□□□ -0.82
CPNE3-205ENST00000522240 IGHV3-49A0A0A0MS15 119 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 HELTA6NFD8 242 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 OVOL1O14753 267 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 ZNF253O75346 499 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms