RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 UBE2E1P51965 193 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 HERVK_113P63121 156 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 NDPQ00604 133 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 ZNF141Q15928 474 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 C9orf153Q5TBE3 101 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 LCN12Q6JVE5 192 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 SGPP2Q8IWX5 399 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 C11orf53Q8IXP5 236 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 OR4X2Q8NGF9 303 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 OR10AG1Q8NH19 301 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 MAL2Q969L2 176 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 UBE2E2Q96LR5 201 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 AQP10Q96PS8 301 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 SMIM14Q96QK8 99 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 MRPL20Q9BYC9 149 aaKnown RBP4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 NMES1Q9C002 83 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 ZNF331Q9NQX6 463 aaPredicted RBP4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 SPCS1Q9Y6A9 102 aa4.68□□□□□ -1.66
NUDCD1-204ENST00000521439 NLRC5Q86WI3 1866 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 NUP210Q8TEM1 1887 aaPredicted RBP4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 KLLNB2CW77 178 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 CCL21O00585 134 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 UQCRQO14949 82 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 SNCGO76070 127 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 CPSF4O95639 269 aaKnown RBP4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 ATP5G1P05496 136 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 FGF6P10767 208 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 GABRG2P18507 467 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 PFN2P35080 140 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 CA7P43166 264 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 PPICP45877 212 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 VDAC2P45880 294 aaPredicted RBP4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 ATP5G3P48201 142 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 PLGLB1Q02325 96 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 ATP5G2Q06055 141 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 LOXL1Q08397 574 aaPredicted RBP4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 EGFEM1PQ0D2K5 195 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 EIF3IQ13347 325 aaKnown RBP4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 DIAPH2-AS1Q14236 149 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 TMEM14EPQ6UXP3 125 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 DPPA3Q6W0C5 159 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 TCF23Q7RTU1 214 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 PIANPQ8IYJ0 282 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 CLECL1Q8IZS7 167 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 OR4K13Q8NH42 304 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 GNPNAT1Q96EK6 184 aaPredicted RBP4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 TVP23CQ96ET8 276 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 C16orf74Q96GX8 76 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 TMEM147Q9BVK8 224 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 SCRT1Q9BWW7 348 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 CYTL1Q9NRR1 136 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 ZNF257Q9Y2Q1 563 aa4.67□□□□□ -1.66
NUDCD1-204ENST00000521439 THSD7BQ9C0I4 1608 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 IGLV3-16A0A075B6K0 115 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 CXorf51AA0A1B0GTR3 108 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 K7N7A8 449 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 ANGPTL7O43827 346 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 NAPSAO96009 420 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 LINC00869P0C866 280 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 HMGA1P17096 107 aaKnown RBP4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 AQP1P29972 269 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 ASIPP42127 132 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 LYZP61626 148 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 RPS24P62847 133 aaKnown RBP4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 ZNF90Q03938 601 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 CDK5R1Q15078 307 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 VMA21Q3ZAQ7 101 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 VAX1Q5SQQ9 334 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 ATOH7Q8N100 152 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 ANKRD29Q8N6D5 301 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 OR51H1Q8NH63 302 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 CMTM2Q8TAZ6 248 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 FMC1Q96HJ9 113 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 PIKFYVEQ9Y2I7 2098 aa4.66□□□□□ -1.66
NUDCD1-204ENST00000521439 THSD7AQ9UPZ6 1657 aa4.65□□□□□ -1.66
NUDCD1-204ENST00000521439 A0A1W2PPM0 123 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 C5orf63A6NC05 138 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 TLCD2A6NGC4 264 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 SMKR1H3BMG3 65 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 H7C1H1 209 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 CCL22O00626 93 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 MRPS12O15235 138 aaKnown RBP4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 PITX3O75364 302 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 IGLV3-27P01718 113 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 IGHG2P01859 326 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 PSMB8P28062 276 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 PRSS3P35030 304 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 OPRM1P35372 400 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 APOC4P55056 127 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 PPP1CAP62136 330 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 RPS11P62280 158 aaKnown RBP eCLIP4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 ARFRP1Q13795 201 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 RRN3P1Q2M238 152 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 C12orf74Q32Q52 190 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 KLF17Q5JT82 389 aaPredicted RBP4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 HES3Q5TGS1 186 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 C3orf22Q8N5N4 141 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 ZIC4Q8N9L1 334 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 SGMS2Q8NHU3 365 aa4.65□□□□□ -1.67
NUDCD1-204ENST00000521439 SRSF12Q8WXF0 261 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms