RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SMIM20Q8N5G0 67 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 FAM24BQ8N5W8 94 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 OR5D14Q8NGL3 314 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 CHCHD1Q96BP2 118 aaKnown RBP0.66□□□□□ -2.3
SKP1-207ENST00000520417 TP53RKQ96S44 253 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 LYSMD1Q96S90 227 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 LINC00467Q9BRT7 94 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 PBOV1Q9GZY1 135 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 SH3BGRL3Q9H299 93 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 CACYBPQ9HB71 228 aaKnown RBP0.66□□□□□ -2.3
SKP1-207ENST00000520417 TMEM14CQ9P0S9 112 aa0.66□□□□□ -2.3
SKP1-207ENST00000520417 MIA2Q96PC5 1412 aa0.65□□□□□ -2.3
SKP1-207ENST00000520417 TRAV10A0A0B4J240 114 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 ODAMA1E959 279 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 E5RI56 91 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 C17orf112F2Z3M2 114 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 F8W1H4 67 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 CCL25O15444 150 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 PIAS1O75925 651 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 CRHP06850 196 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 RAB5CP51148 216 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 INSL3P51460 131 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 GNG3P63215 75 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 MSMO1Q15800 293 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 MPV17LQ2QL34 196 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 C3orf33Q6P1S2 294 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 C4orf22Q6V702 233 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 TEN1Q86WV5 123 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 GKN2Q86XP6 184 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 NEK7Q8TDX7 302 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 ZNF431Q8TF32 576 aaPredicted RBP0.65□□□□□ -2.31
SKP1-207ENST00000520417 GINS3Q9BRX5 216 aa0.65□□□□□ -2.31
SKP1-207ENST00000520417 HEATR1Q9H583 2144 aaKnown RBP0.65□□□□□ -2.31
SKP1-207ENST00000520417 TAF1LQ8IZX4 1826 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 GPR98Q8WXG9 6306 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 TLCD2A6NGC4 264 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 OR2T8A6NH00 312 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 TMEM238C9JI98 176 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 E7EUB6 86 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 M0R2N4 97 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 RER1O15258 196 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 ERC2-IT1O76042 136 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 TRGC2P03986 189 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 GLRXP35754 106 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 CRYBA4P53673 196 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 ARPP19P56211 112 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 RTL8BQ17RB0 113 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 C1orf134Q5TEV5 83 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 GRINAQ7Z429 371 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 OR5D16Q8NGK9 328 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 RAB37Q96AX2 223 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 GPX7Q96SL4 187 aaPredicted RBP0.64□□□□□ -2.31
SKP1-207ENST00000520417 HOPXQ9BPY8 73 aaPredicted RBP0.64□□□□□ -2.31
SKP1-207ENST00000520417 GGACTQ9BVM4 153 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 RTL8AQ9BWD3 113 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 BIN3Q9NQY0 253 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 ORMDL1Q9P0S3 153 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 DOCK4Q8N1I0 1966 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 CHD3Q12873 2000 aaKnown RBP0.64□□□□□ -2.31
SKP1-207ENST00000520417 RIMBP3CA6NJZ7 1639 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 RIMBP3BA6NNM3 1639 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 RIMBP3Q9UFD9 1639 aa0.64□□□□□ -2.31
SKP1-207ENST00000520417 TNRC6AQ8NDV7 1962 aaKnown RBP0.63□□□□□ -2.31
SKP1-207ENST00000520417 OBSL1O75147 1896 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 IGHV1-58A0A0C4DH39 117 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 H3BRM9 83 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 GPR31O00270 319 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 INE1O15225 51 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 MFSD11O43934 449 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 CST7O76096 145 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 IFNA4P05014 189 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 IDO1P14902 403 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 DSCR4P56555 118 aaPredicted RBP0.63□□□□□ -2.31
SKP1-207ENST00000520417 ROMO1P60602 79 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 VBP1P61758 197 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 CIRBPQ14011 172 aaKnown RBP0.63□□□□□ -2.31
SKP1-207ENST00000520417 LTC4SQ16873 150 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 DCUN1D2Q6PH85 259 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 NUP35Q8NFH5 326 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 PRRT1Q99946 306 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 MAP1LC3BQ9GZQ8 125 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 BOLA2Q9H3K6 86 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 TMEM138Q9NPI0 162 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 LAMTOR3Q9UHA4 124 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 CHCHD2Q9Y6H1 151 aaPredicted RBP0.63□□□□□ -2.31
SKP1-207ENST00000520417 V9GYQ6 96 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 CEP192Q8TEP8 1941 aa0.63□□□□□ -2.31
SKP1-207ENST00000520417 STRCQ7RTU9 1775 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 PCF11O94913 1555 aaKnown RBP0.62□□□□□ -2.31
SKP1-207ENST00000520417 A0A096LPI6 279 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 MAP1LC3B2A6NCE7 125 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 B4DSR2 109 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 PPP5D1E7EU14 171 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 H3BQV1 296 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 K7ERJ3 54 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 NCR3O14931 201 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 LYRM1O43325 122 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 NUPR1O60356 82 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 HIST1H2BKO60814 126 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 MT-ND6P03923 174 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms