RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
ERGIC1-208ENST00000520399 DUX4L9Q6RFH8 374 aaPredicted RBP9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 Q6ZWC4 215 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 IFI27L1Q96BM0 104 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 NBR2O15453 112 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 SRSF7Q16629 238 aaKnown RBP eCLIP9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 BMPERQ8N8U9 685 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 FGFBP3Q8TAT2 258 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 NCR2O95944 276 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 CGB3P0DN86 165 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 GGNQ86UU5 652 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 PAQR4Q8N4S7 273 aaPredicted RBP9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 ZNF319Q9P2F9 582 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 CCL3L1P16619 93 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 THSD7BQ9C0I4 1608 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 FAM90A9PA6NNJ1 464 aa9.98□□□□□ -0.81
ERGIC1-208ENST00000520399 TEX48A0A1B0GUV7 120 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 C1orf122Q6ZSJ8 110 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 C17orf82Q86X59 251 aaPredicted RBP9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 CHAC1Q9BUX1 264 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 SCN5AQ14524 2016 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 MYOFQ9NZM1 2061 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 COA6Q5JTJ3 125 aaKnown RBP9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 C8orf86Q6ZUL3 223 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 NABP1Q96AH0 204 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 TMEM133Q9H2Q1 129 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 F5P12259 2224 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 TFF1P04155 84 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 PFN1P07737 140 aaKnown RBP9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 TSKUQ8WUA8 353 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 EFNA2O43921 213 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 SIGLEC15Q6ZMC9 328 aa9.97□□□□□ -0.81
ERGIC1-208ENST00000520399 PIKFYVEQ9Y2I7 2098 aa9.96□□□□□ -0.81
ERGIC1-208ENST00000520399 THBDP07204 575 aa9.96□□□□□ -0.81
ERGIC1-208ENST00000520399 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 ZNF561-AS1K7EIQ3 104 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 CGB7P0DN87 165 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 PLXNA3P51805 1871 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 IGHV3OR16-8A0A075B7F1 116 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 GNG5P63218 68 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 OCC1Q8TAD7 63 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 TMEM190Q8WZ59 177 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 TRGV1A0A0A0MS02 117 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 IGHG3P01860 377 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 WFDC1Q9HC57 220 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 LY96Q9Y6Y9 160 aa9.96□□□□□ -0.82
ERGIC1-208ENST00000520399 E9PLN8 166 aa9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 LYL1P12980 280 aa9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 GATA2P23769 480 aaPredicted RBP9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 TDRD6O60522 2096 aaKnown RBP9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 IGHV1-46P01743 117 aa9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 PSG8Q9UQ74 426 aa9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 C9JAW5 83 aa9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 C9JQL5 133 aa9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 COX8AP10176 69 aa9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 ZNF876PQ49A33 203 aa9.95□□□□□ -0.82
ERGIC1-208ENST00000520399 KLRD1Q13241 179 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 SPACA3Q8IXA5 215 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 RNF125Q96EQ8 232 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 UBL5Q9BZL1 73 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 CCDC88CQ9P219 2028 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 URB1O60287 2271 aaKnown RBP9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 SBF1O95248 1867 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 RMI2Q96E14 147 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 IGLL1P15814 213 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 Q0VFX4 171 aa9.94□□□□□ -0.82
ERGIC1-208ENST00000520399 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 PRCDQ00LT1 54 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 FAM90A2PQ658T7 463 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 RNASE7Q9H1E1 156 aaKnown RBP9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 IGKV1D-8A0A087WSZ0 117 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 SIVA1O15304 175 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 WNT2P09544 360 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 PAX8Q06710 450 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 FOXF2Q12947 444 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 THAP8Q8NA92 274 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 RPRMLQ8N4K4 120 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 IGKV1-12A0A0C4DH73 117 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 IGKV1D-12P01611 117 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 IGLC1P0CG04 106 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 TRAV25A0A0B4J276 109 aa9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 RPL35AP18077 110 aaKnown RBP9.93□□□□□ -0.82
ERGIC1-208ENST00000520399 DSCR9P59020 149 aa9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 PRB3Q04118 309 aaPredicted RBP9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 LSM4Q9Y4Z0 139 aaKnown RBP9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 PNRC2Q9NPJ4 139 aaKnown RBP9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 CKAP5Q14008 2032 aa9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 IGKV1-27A0A075B6S5 117 aa9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 C15orf53Q8NAA6 179 aa9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 SMIM2Q9BVW6 85 aa9.92□□□□□ -0.82
ERGIC1-208ENST00000520399 IGHV1-24A0A0C4DH33 117 aa9.91□□□□□ -0.82
ERGIC1-208ENST00000520399 NPIPB5A8MRT5 1133 aa9.91□□□□□ -0.82
ERGIC1-208ENST00000520399 VCYO14598 125 aa9.91□□□□□ -0.82
ERGIC1-208ENST00000520399 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
ERGIC1-208ENST00000520399 PPIFP30405 207 aaKnown RBP9.91□□□□□ -0.82
ERGIC1-208ENST00000520399 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
ERGIC1-208ENST00000520399 CD55P08174 381 aa9.91□□□□□ -0.82
ERGIC1-208ENST00000520399 ID3Q02535 119 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms