RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.09	□□□□□ -1.59
SDCBP-208	ENST00000520228	TG	P01266	2768 aa		5.09	□□□□□ -1.6
SDCBP-208	ENST00000520228	CMYA5	Q8N3K9	4069 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	IGHV3-21	A0A0B4J1V1	117 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228		A0A0B4J2A0	478 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	OR2T8	A6NH00	312 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	INS-IGF2	F8WCM5	200 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228		K7EIM0	57 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	LGALS9	O00182	355 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	NDUFB6	O95139	128 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	SULT1A3	P0DMM9	295 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	SULT1A4	P0DMN0	295 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	SPN	P16150	400 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	SUB1	P53999	127 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228		Q56UQ5	140 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	PLET1	Q6UQ28	207 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	LYZL2	Q7Z4W2	148 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	STH	Q8IWL8	128 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	CENPS	Q8N2Z9	138 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	OR52E5	Q8NH55	327 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	C7orf50	Q9BRJ6	194 aa	Known RBP	5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	BATF3	Q9NR55	127 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	SIGLEC8	Q9NYZ4	499 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	TECR	Q9NZ01	308 aa	Known RBP	5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	SHPK	Q9UHJ6	478 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	TNC	P24821	2201 aa		5.08	□□□□□ -1.6
SDCBP-208	ENST00000520228	IGHV3-35	A0A0C4DH35	117 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	CEBPZOS	A8MTT3	80 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228		I3L2K1	104 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	PLA2G10	O15496	165 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	TGOLN2	O43493	480 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	SFT2D2	O95562	160 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	MT-CO2	P00403	227 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	IGLV1-51	P01701	117 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	RNASE2	P10153	161 aa	Known RBP	5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	FOLR2	P14207	255 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	UBE2M	P61081	183 aa	Known RBP	5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	PPP1R1A	Q13522	171 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	SMCO1	Q147U7	214 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	ANKRD55	Q3KP44	614 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	NMS	Q5H8A3	153 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	UBAC2	Q8NBM4	344 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	S100Z	Q8WXG8	99 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	PINX1	Q96BK5	328 aa	Known RBP	5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	ATP6V0B	Q99437	205 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	CCDC32	Q9BV29	185 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	FLVCR2	Q9UPI3	526 aa		5.07	□□□□□ -1.6
SDCBP-208	ENST00000520228	DUXB	A0A1W2PPF3	345 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	C9orf170	A2RU37	121 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	C2orf70	A6NJV1	201 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	RPL37AP8	A6NKH3	93 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	CORT	O00230	105 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	NUPL2	O15504	423 aa	Known RBP	5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	LYRM1	O43325	122 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	IGHV3-48	P01763	117 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	CTSG	P08311	255 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	GP9	P14770	177 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	CBLN1	P23435	193 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	BTC	P35070	178 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	HTR2B	P41595	481 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	TNFRSF9	Q07011	255 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	PVRIG	Q6DKI7	326 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	LCN12	Q6JVE5	192 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	UNQ9165/PRO28630	Q6UXU0	137 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	ADAMTSL5	Q6ZMM2	481 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	DUSP18	Q8NEJ0	188 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	OR1S1	Q8NH92	325 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	DYNLRB2	Q8TF09	96 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	TXN2	Q99757	166 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	CHRDL1	Q9BU40	450 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	ZNF436	Q9C0F3	470 aa	Predicted RBP	5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	PALMD	Q9NP74	551 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	UFC1	Q9Y3C8	167 aa		5.06	□□□□□ -1.6
SDCBP-208	ENST00000520228	TMEM213	A2RRL7	107 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228		A8MWP6	167 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	NDUFA4	O00483	81 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	GNG7	O60262	68 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	YIF1A	O95070	293 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	IFNA10	P01566	189 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	OR4E1	P0C645	316 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	SLC25A6	P12236	298 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	OPRK1	P41145	380 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	DHRS2	Q13268	280 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	ZNF846	Q147U1	533 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	DEFB114	Q30KQ6	69 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	BSX	Q3C1V8	233 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	C2orf83	Q53S99	150 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	LYG2	Q86SG7	212 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	OR2K2	Q8NGT1	345 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	COQ8A	Q8NI60	647 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	DTD1	Q8TEA8	209 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	MARC2	Q969Z3	335 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	C20orf24	Q9BUV8	137 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	RBKS	Q9H477	322 aa		5.05	□□□□□ -1.6
SDCBP-208	ENST00000520228	IGHV3OR16-8	A0A075B7F1	116 aa		5.04	□□□□□ -1.6
SDCBP-208	ENST00000520228	FAM240B	A0A1B0GVZ2	78 aa		5.04	□□□□□ -1.6
SDCBP-208	ENST00000520228	IZUMO1R	A6ND01	250 aa		5.04	□□□□□ -1.6
SDCBP-208	ENST00000520228		K7EMT4	169 aa		5.04	□□□□□ -1.6
SDCBP-208	ENST00000520228	PITX3	O75364	302 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms