RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 CAMPP49913 170 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 RAB9AP51151 201 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 FOXA3P55318 350 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 MLF1P58340 268 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 UBE2L3P68036 154 aaKnown RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 PSG7Q13046 419 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 SLAQ13239 276 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 C1orf61Q13536 156 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 EIF4EBP1Q13541 118 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 IL11RAQ14626 422 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 POU2AF1Q16633 256 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 C2orf83Q53S99 150 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 DMRTC1Q5HYR2 192 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 C10orf113Q5VZT2 155 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 LCN12Q6JVE5 192 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 Q6P435 159 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 Q75L30 129 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 SSX8Q7RTT4 187 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 DEFB132Q7Z7B7 95 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 SLC22A18ASQ8N1D0 253 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 TTC9CQ8N5M4 171 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 ZNF418Q8TF45 676 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 SNRNP40Q96DI7 357 aaKnown RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 COQ2Q96H96 371 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 IGF2BP2-AS1Q96M15 143 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 KLHDC3Q9BQ90 382 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 PAXXQ9BUH6 204 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 PRRG4Q9BZD6 226 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 CXXC4Q9H2H0 198 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 FNDC4Q9H6D8 234 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 ZNF355PQ9NSJ1 428 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 OR1A1Q9P1Q5 309 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 EPDR1Q9UM22 224 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 BOKQ9UMX3 212 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 KLF12Q9Y4X4 402 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 PPIAL4AQ9Y536 164 aa2.77□□□□□ -1.97
CSMD3-209ENST00000519485 CHCHD2Q9Y6H1 151 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-209ENST00000519485 PHF3Q92576 2039 aaKnown RBP2.76□□□□□ -1.97
CSMD3-209ENST00000519485 TRBV20-1A0A075B6N2 111 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 A0A087X0K7 114 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 PPIAL4CA0A0B4J2A2 164 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 A0A0J9YW62 118 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 A0A1B0GUT8 65 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 C15orf61A6NNL5 157 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 ZNF716A6NP11 495 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 C17orf98A8MV24 154 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 C10orf142B7Z368 130 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 PRSS46E5RG02 174 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 F2Z2F3 143 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 LINC01619G3V211 115 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-209ENST00000519485 J3KRW8 73 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 FCGR3BO75015 233 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 SS18L1O75177 396 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-209ENST00000519485 SCGB2A1O75556 95 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 SCRG1O75711 98 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 KLF7O75840 302 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-209ENST00000519485 IGLV1-44P01699 117 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 HBDP02042 147 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 SLC25A5P05141 298 aaKnown RBP2.76□□□□□ -1.97
CSMD3-209ENST00000519485 IGHV4-34P06331 123 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 PPIAL4GP0DN37 164 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 GABRG2P18507 467 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 CA6P23280 308 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 OTX2P32243 289 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 GFERP55789 205 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 KRTAP10-8P60410 259 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 RPL30P62888 115 aaKnown RBP2.76□□□□□ -1.97
CSMD3-209ENST00000519485 RPL8P62917 257 aaKnown RBP2.76□□□□□ -1.97
CSMD3-209ENST00000519485 PRCDQ00LT1 54 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 SMAGPQ0VAQ4 97 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 KLRD1Q13241 179 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 FXYD3Q14802 87 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 GUSBP1Q15486 140 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 C5orf64Q2M2E5 130 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 LYPD1Q8N2G4 141 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 Q8N7P7 452 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 GATD1Q8NB37 220 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 OR10X1Q8NGY0 326 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 LRRC29Q8WV35 223 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 SSMEM1Q8WWF3 244 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 ARPC1AQ92747 370 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 ZNF488Q96MN9 340 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 DEFB118Q96PH6 123 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 GEMIN7Q9H840 131 aaKnown RBP2.76□□□□□ -1.97
CSMD3-209ENST00000519485 TMEM14BQ9NUH8 114 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 GNG12Q9UBI6 72 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 ATG2BQ96BY7 2078 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 RALGAPA1Q6GYQ0 2036 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 PCNX3Q9H6A9 2034 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 LRP4O75096 1905 aa2.76□□□□□ -1.97
CSMD3-209ENST00000519485 TET1Q8NFU7 2136 aa2.75□□□□□ -1.97
CSMD3-209ENST00000519485 TNRC6BQ9UPQ9 1833 aaKnown RBP2.75□□□□□ -1.97
CSMD3-209ENST00000519485 TNRC6AQ8NDV7 1962 aaKnown RBP2.75□□□□□ -1.97
CSMD3-209ENST00000519485 IGHV3-15A0A0B4J1V0 119 aa2.75□□□□□ -1.97
CSMD3-209ENST00000519485 A0A1W2PRD5 423 aa2.75□□□□□ -1.97
CSMD3-209ENST00000519485 A0A1W2PRF3 423 aa2.75□□□□□ -1.97
CSMD3-209ENST00000519485 A0A1W2PRM7 423 aa2.75□□□□□ -1.97
CSMD3-209ENST00000519485 C5orf63A6NC05 138 aa2.75□□□□□ -1.97
CSMD3-209ENST00000519485 TMEM8BA6NDV4 472 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms