RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 TXNL4BQ9NX01 149 aaKnown RBP3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 EPDR1Q9UM22 224 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 TNFSF18Q9UNG2 199 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 FAM215AQ9Y5M1 114 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 ARHGAP31Q2M1Z3 1444 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 LMTK2Q8IWU2 1503 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 RICTORQ6R327 1708 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 UBR2Q8IWV8 1755 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 KIF13AQ9H1H9 1805 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 MYH7BA7E2Y1 1941 aa3.32□□□□□ -1.88
CTNNA1-202ENST00000517533 MYH11P35749 1972 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 LCTP09848 1927 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 WDR90Q96KV7 1748 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 TET3O43151 1660 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 DEPDC5O75140 1603 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 ABCA6Q8N139 1617 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 VWDEQ8N2E2 1590 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 DIP2CQ9Y2E4 1556 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 AGLP35573 1532 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 PRDM15P57071 1507 aaPredicted RBP3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 CNTLNQ9NXG0 1405 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 IBTKQ9P2D0 1353 aaPredicted RBP3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 GNRH2O43555 120 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 TPST1O60507 370 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 NCS1P62166 190 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 EIF4EBP1Q13541 118 aaPredicted RBP3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 KHDC3LQ587J8 217 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 GGACTQ9BVM4 153 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 R4GN34 69 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 NACAE9PAV3 2078 aa3.31□□□□□ -1.88
CTNNA1-202ENST00000517533 BCORL1Q5H9F3 1711 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 PPRC1Q5VV67 1664 aaKnown RBP3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 RNF17Q9BXT8 1623 aaKnown RBP3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 IGLV3-9A0A075B6K5 115 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 TRGV10A0A0A0MS01 117 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 TRGV5A0A0B4J1U4 118 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 TRAV13-1A0A0B4J241 112 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 TP53I11O14683 189 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 SHBGP04278 402 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 LINC00694P0DN24 101 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 CRYGAP11844 174 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 ZNF14P17017 642 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 RPL35P42766 123 aaKnown RBP3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 NDUFA6P56556 154 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 RPS25P62851 125 aaKnown RBP3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 DYNLT1P63172 113 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 FAM27BQ5VT28 67 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 LYZL1Q6UWQ5 148 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 TMEM106AQ96A25 262 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 LINC00470Q9BZP3 86 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 DUSP21Q9H596 190 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 NIT2Q9NQR4 276 aa3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 N4BP2Q86UW6 1770 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-202ENST00000517533 FRMPD1Q5SYB0 1578 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 PRRC2AP48634 2157 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 ABCC3O15438 1527 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 TRPM2O94759 1503 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 EFCAB6Q5THR3 1501 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 SPATA31E1Q6ZUB1 1445 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 DSPPQ9NZW4 1301 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 H3BMG7 143 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 HIST1H2BKO60814 126 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 HIST1H2BJP06899 126 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 HLA-EP13747 358 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 AMMECR1LQ6DCA0 310 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 AQP3Q92482 292 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 KLK12Q9UKR0 248 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 TIMM9Q9Y5J7 89 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 E9PCH4 1651 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 ZC3H13Q5T200 1668 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 MROH1Q8NDA8 1641 aa3.29□□□□□ -1.88
CTNNA1-202ENST00000517533 CCDC88AQ3V6T2 1871 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 NYNRINQ9P2P1 1898 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 SPHKAPQ2M3C7 1700 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 A0A1B0GVG6 124 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 CPSF4O95639 269 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 CLPSP04118 112 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 IGLC6P0CF74 106 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 RPL22P35268 128 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 WHAMMP3Q1A5X7 153 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 EIF5AL1Q6IS14 154 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 PATE2Q6UY27 113 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 RNF182Q8N6D2 247 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 OR4K15Q8NH41 348 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 ARL11Q969Q4 196 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 ZNF714Q96N38 554 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 HS3ST2Q9Y278 367 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 HSPE1-MOB4S4R3N1 261 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 RALGAPBQ86X10 1494 aa3.28□□□□□ -1.88
CTNNA1-202ENST00000517533 FER1L6Q2WGJ9 1857 aa3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 ANKRD31Q8N7Z5 1873 aa3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 TRAV40A0A0B4J280 105 aa3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 H7C2G1 150 aa3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 K7ERU9 68 aa3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 TCL1BO95988 128 aa3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 S100PP25815 95 aa3.27□□□□□ -1.89
CTNNA1-202ENST00000517533 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms