RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PRELID3AQ96N28 172 aa8.84□□□□□ -0.99
PCDHGA1-202ENST00000517417 ZNRD1Q9P1U0 126 aa8.84□□□□□ -0.99
PCDHGA1-202ENST00000517417 LY96Q9Y6Y9 160 aa8.84□□□□□ -0.99
PCDHGA1-202ENST00000517417 TRAV40A0A0B4J280 105 aa8.84□□□□□ -1
PCDHGA1-202ENST00000517417 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -1
PCDHGA1-202ENST00000517417 F2Z2F3 143 aa8.84□□□□□ -1
PCDHGA1-202ENST00000517417 CEACAM4O75871 244 aa8.84□□□□□ -1
PCDHGA1-202ENST00000517417 APOHP02749 345 aaPredicted RBP8.84□□□□□ -1
PCDHGA1-202ENST00000517417 PPIFP30405 207 aaKnown RBP8.84□□□□□ -1
PCDHGA1-202ENST00000517417 MLANAQ16655 118 aa8.84□□□□□ -1
PCDHGA1-202ENST00000517417 ARL17AQ8IVW1 177 aa8.84□□□□□ -1
PCDHGA1-202ENST00000517417 C11orf44Q8N8P7 122 aa8.84□□□□□ -1
PCDHGA1-202ENST00000517417 CIDEAO60543 219 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 WNT2P09544 360 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 AREGP15514 252 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 LYRM7Q5U5X0 104 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 TMEM219Q86XT9 240 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 EPDR1Q9UM22 224 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 PRR14LQ5THK1 2151 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 A0A1W2PRX2 142 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 C10orf142B7Z368 130 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 ADIPOQQ15848 244 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 LYPD2Q6UXB3 125 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 TEX43Q6ZNM6 134 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 CHD3Q12873 2000 aaKnown RBP8.83□□□□□ -1
PCDHGA1-202ENST00000517417 TRAV9-2A0A087WT02 112 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 A0A1W2PRE2 83 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 TSPOP30536 169 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 TECTAO75443 2155 aa8.83□□□□□ -1
PCDHGA1-202ENST00000517417 IGF2RP11717 2491 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 TRAV8-6A0A0B4J262 113 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 IGKV1-16P04430 117 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 TDRG1Q3Y452 100 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 KIR2DL4Q99706 377 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 PMCHL2Q9BQD1 86 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 TMEM160Q9NX00 188 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 FREM1Q5H8C1 2179 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 C12orf54Q6X4T0 127 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 ALKBH7Q9BT30 221 aaPredicted RBP8.82□□□□□ -1
PCDHGA1-202ENST00000517417 VWC2Q2TAL6 325 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 TPTE2P1Q5T6R2 138 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 ITLN2Q8WWU7 325 aaPredicted RBP8.82□□□□□ -1
PCDHGA1-202ENST00000517417 HIST1H4GQ99525 98 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 ABCA2Q9BZC7 2435 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 A0A1B0GWJ7 208 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 FAM71F2Q6NXP2 309 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 PIP4P1Q86T03 277 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 FMC1Q96HJ9 113 aa8.82□□□□□ -1
PCDHGA1-202ENST00000517417 PMS2P5A8MQ11 134 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 K7EN84 100 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 SRD5A1P18405 259 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 CIARTQ8N365 385 aaPredicted RBP8.81□□□□□ -1
PCDHGA1-202ENST00000517417 V9GYV3 84 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 MYO9AB2RTY4 2548 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 PSG1P11464 419 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 VDAC2P45880 294 aaPredicted RBP8.81□□□□□ -1
PCDHGA1-202ENST00000517417 BRD3OSQ6XYD6 125 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 FER1L6-AS1Q8NA97 138 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 WFDC12Q8WWY7 111 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 ZNF414Q96IQ9 312 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 EML6Q6ZMW3 1958 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 PSMB11A5LHX3 300 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 GAGE10A6NGK3 116 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 COL8A2P25067 703 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 TSKUQ8WUA8 353 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 GAFA1Q96PS6 74 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 IGHV1-3A0A0C4DH29 117 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 GNLYP22749 145 aa8.81□□□□□ -1
PCDHGA1-202ENST00000517417 FAM181BA6NEQ2 426 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 RNASE4P34096 147 aaKnown RBP8.8□□□□□ -1
PCDHGA1-202ENST00000517417 FBLN7Q53RD9 439 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 C19orf54Q5BKX5 351 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 EXOC3-AS1Q8N2X6 119 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 ZNF257Q9Y2Q1 563 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 NPIPB5A8MRT5 1133 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 PF4P02776 101 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 TDGF1P13385 188 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 OTORQ9NRC9 128 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 CELSR3Q9NYQ7 3312 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 FABP5P3A8MUU1 101 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 NDUFS8O00217 210 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 ASIPP42127 132 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 GAGE1Q13065 139 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 NUDT10Q8NFP7 164 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 NUDT11Q96G61 164 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 PSG8Q9UQ74 426 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 DYSFO75923 2080 aa8.8□□□□□ -1
PCDHGA1-202ENST00000517417 DAZAP2Q15038 168 aaPredicted RBP8.79□□□□□ -1
PCDHGA1-202ENST00000517417 C15orf32Q32M92 178 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 PVRIGQ6DKI7 326 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 C5orf30Q96GV9 206 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 TMEM170BQ5T4T1 132 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 TEX29Q8N6K0 151 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 LINC00479Q96M42 142 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 TNCP24821 2201 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 UBE2L6O14933 153 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 SLC25A48Q6ZT89 311 aaKnown RBP8.79□□□□□ -1
PCDHGA1-202ENST00000517417 NIT1Q86X76 327 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 TNFRSF14Q92956 283 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 RCHY1Q96PM5 261 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms