RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 CTRB1P17538 263 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 PSMA1P25786 263 aaKnown RBP2.74□□□□□ -1.97
LINC00534-201ENST00000517400 ETV1P50549 477 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 RORCP51449 518 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 CCR6P51684 374 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 ZNF137PP52743 207 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 DEFA1P59665 94 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 DEFA3P59666 94 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 TPBGQ13641 420 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 GPR176Q14439 515 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 RTL8BQ17RB0 113 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 VMA21Q3ZAQ7 101 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 C10orf55Q5SWW7 151 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 RNASEKQ6P5S7 137 aaKnown RBP2.74□□□□□ -1.97
LINC00534-201ENST00000517400 CD200R1LQ6Q8B3 271 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 CLEC19AQ6UXS0 136 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 TMPRSS11AQ6ZMR5 421 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 SSX9Q7RTT3 188 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 SNX29P2Q8IUI4 249 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 UBE2DNLQ8IWF7 75 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 UBAC2Q8NBM4 344 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 OR2K2Q8NGT1 345 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 KCNG3Q8TAE7 436 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 MRPL30Q8TCC3 161 aaKnown RBP2.74□□□□□ -1.97
LINC00534-201ENST00000517400 MARCH1Q8TCQ1 289 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 MAFIPQ8WZ33 124 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 GHSRQ92847 366 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 SLC25A46Q96AG3 418 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 USMG5Q96IX5 58 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 SULT4A1Q9BR01 284 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 C20orf24Q9BUV8 137 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 PLEKHJ1Q9NW61 149 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 CLEC2DQ9UHP7 191 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 SSR3Q9UNL2 185 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 CSDC2Q9Y534 153 aaKnown RBP2.74□□□□□ -1.97
LINC00534-201ENST00000517400 F11RQ9Y624 299 aaKnown RBP2.74□□□□□ -1.97
LINC00534-201ENST00000517400 PKD1P98161 4303 aa2.74□□□□□ -1.97
LINC00534-201ENST00000517400 HSPG2P98160 4391 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 IGLV2-18A0A075B6J9 118 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 TRAV8-7A0A075B6U6 113 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 IGHV3-49A0A0A0MS15 119 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 IGHV3-74A0A0B4J1X5 117 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 TRDV1A0A1B0GX56 115 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 FAM223BA6NKX1 122 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 H3BUA1 57 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 GOSR2O14653 212 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 YPEL1O60688 119 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 GGCTO75223 188 aaKnown RBP2.73□□□□□ -1.97
LINC00534-201ENST00000517400 YIF1AO95070 293 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 CD3GP09693 182 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 ZNF735P0CB33 412 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 LIMS3P0CW19 117 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 LIMS4P0CW20 117 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 GALP22466 123 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 HERVK_113P61574 105 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 HLA-DRB3P79483 266 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 LGALS9CQ6DKI2 356 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 LAMTOR1Q6IAA8 161 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 ZNF767PQ75MW2 155 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 PDPNQ86YL7 162 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 APRG1Q8IVJ8 170 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 FAM223AQ8IWN6 122 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 CDH26Q8IXH8 852 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 OR11H2Q8NH07 326 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 OR4A5Q8NH83 315 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 CD300LFQ8TDQ1 290 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 AP3S1Q92572 193 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 FAM210AQ96ND0 272 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 YPEL2Q96QA6 119 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 GINS4Q9BRT9 223 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 HINT2Q9BX68 163 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 SRRQ9GZT4 340 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 OR2D2Q9H210 308 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 TXNL4BQ9NX01 149 aaKnown RBP2.73□□□□□ -1.97
LINC00534-201ENST00000517400 ZNF230Q9UIE0 474 aaPredicted RBP2.73□□□□□ -1.97
LINC00534-201ENST00000517400 TBC1D24Q9ULP9 559 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 PAIP2BQ9ULR5 123 aaKnown RBP2.73□□□□□ -1.97
LINC00534-201ENST00000517400 V9GYH0 126 aa2.73□□□□□ -1.97
LINC00534-201ENST00000517400 IGLV11-55A0A075B6I3 123 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 A0A096LNJ9 63 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.72□□□□□ -1.97
LINC00534-201ENST00000517400 A0A0B4J2A0 478 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 PLAC8L1A1L4L8 177 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 OR2T8A6NH00 312 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 J3QRE1 110 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 RGS5O15539 181 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 S1PR2O95136 353 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 IFNA10P01566 189 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 HLA-DQB1P01920 261 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 SCTP09683 121 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 TRAPPC2P0DI81 140 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 TRAPPC2BP0DI82 140 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 HTN3P15516 51 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 CBLN1P23435 193 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 SDC2P34741 201 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 CXCL5P42830 114 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 EIF2B2P49770 351 aaKnown RBP2.72□□□□□ -1.97
LINC00534-201ENST00000517400 TAS2R43P59537 309 aa2.72□□□□□ -1.97
LINC00534-201ENST00000517400 RPS25P62851 125 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms