RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 ROMO1P60602 79 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 RHOGP84095 191 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 CCDC153Q494R4 210 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 TMEM155Q4W5P6 130 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 SOSTDC1Q6X4U4 206 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 C7orf65Q6ZTY9 151 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 MED12LQ86YW9 2145 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 TMEM229BQ8NBD8 167 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 ZNF418Q8TF45 676 aaPredicted RBP0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 SLC50A1Q9BRV3 221 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 LXNQ9BS40 222 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 CST9LQ9H4G1 147 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 TMEM106BQ9NUM4 274 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 RASL12Q9NYN1 266 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 LY96Q9Y6Y9 160 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 PXDNLA1KZ92 1463 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 CEP164Q9UPV0 1460 aa0.6□□□□□ -2.31
RN7SKP88-201ENST00000516847 PCDH15Q96QU1 1955 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 TAF1LQ8IZX4 1826 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 BAHCC1Q9P281 2608 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 BRWD1Q9NSI6 2320 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 MICAL3Q7RTP6 2002 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 CEP152O94986 1710 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 GLI3P10071 1580 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 TRAV27A0A087WT01 109 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 TRAV12-1A0A0B4J245 112 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 TRBV27A0A0K0K1C4 114 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 E7EUB6 86 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 M0QZK8 103 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 RER1O15258 196 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 ARPC5O15511 151 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 LYZL6O75951 148 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 HMGN1P05114 100 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 GPX1P07203 203 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 CXCL1P09341 107 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 ASAH2BP0C7U1 165 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 UBBP0CG47 229 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 MGST1P10620 155 aaKnown RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 SDC2P34741 201 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 ZNF93P35789 620 aaPredicted RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 SRP9P49458 86 aaKnown RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 RAB5CP51148 216 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 DSCR4P56555 118 aaPredicted RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 MRPS36P82909 103 aaKnown RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 KLRD1Q13241 179 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 SMCO1Q147U7 214 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 MSMO1Q15800 293 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 KRTAP6-3Q3LI67 103 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 KRTAP13-4Q3LI77 160 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 MORN2Q502X0 79 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 Q6ZRN7 208 aaPredicted RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 COA5Q86WW8 74 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 RPS19BP1Q86WX3 136 aaKnown RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 Q8IYB0 196 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 LINC00311Q8N616 119 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 LINC00301Q8NCQ3 95 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 RNASE11Q8TAA1 199 aaKnown RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 C4orf3Q8WVX3 66 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 MAFIPQ8WZ33 124 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 DIRC1Q969H9 104 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 CHCHD1Q96BP2 118 aaKnown RBP0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 ZNF714Q96N38 554 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 OR5AC2Q9NZP5 309 aa0.59□□□□□ -2.31
RN7SKP88-201ENST00000516847 A2MP01023 1474 aa0.59□□□□□ -2.32
RN7SKP88-201ENST00000516847 FREM1Q5H8C1 2179 aa0.59□□□□□ -2.32
RN7SKP88-201ENST00000516847 COL4A5P29400 1685 aa0.59□□□□□ -2.32
RN7SKP88-201ENST00000516847 ARHGEF11O15085 1522 aa0.59□□□□□ -2.32
RN7SKP88-201ENST00000516847 ANKRD31Q8N7Z5 1873 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 ARHGEF10O15013 1369 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 MED23Q9ULK4 1368 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 KDM6AO15550 1401 aaPredicted RBP0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 TNS3Q68CZ2 1445 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 KIAA1107Q9UPP5 1409 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 ALPK2Q86TB3 2170 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 DOCK10Q96BY6 2186 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 TRAV13-1A0A0B4J241 112 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 TRAV1-1A0A0B4J248 108 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 ODAMA1E959 279 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 TMEM189A5PLL7 270 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 C2orf70A6NJV1 201 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 H3BMG7 143 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 LYRM1O43325 122 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 MRPS14O60783 128 aaKnown RBP0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 IGLV1-51P01701 117 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 FABP2P12104 132 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 RPL22P35268 128 aaKnown RBP0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 SSR2P43308 183 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 CNBPP62633 177 aaKnown RBP0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 OR8B8Q15620 311 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 VMA21Q3ZAQ7 101 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 PCOTHQ58A44 107 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 RNASE10Q5GAN6 216 aaKnown RBP0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 KRTAP26-1Q6PEX3 210 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 C2orf82Q6UX34 121 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 HRCT1Q6UXD1 115 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 PP632Q6XCG6 107 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 FP248Q71RG6 208 aaPredicted RBP0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 LINC00305Q7Z4B0 112 aa0.58□□□□□ -2.32
RN7SKP88-201ENST00000516847 OR8I2Q8N0Y5 310 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms