RNA–Protein interactions for RNA: ENST00000516258.1

RNU4-71P-201, Transcript of RNA, U4 small nuclear 71, pseudogene, humanhuman

BASIC

Gene RNU4-71P, Length 113 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-71P-201ENST00000516258 MAP2P11137 1827 aaKnown RBP-2.45□□□□□ -2.8
RNU4-71P-201ENST00000516258 DNAH6Q9C0G6 4158 aa-2.45□□□□□ -2.8
RNU4-71P-201ENST00000516258 NHSL1Q5SYE7 1610 aa-2.46□□□□□ -2.8
RNU4-71P-201ENST00000516258 IGLV1-51P01701 117 aa-2.46□□□□□ -2.8
RNU4-71P-201ENST00000516258 IGHV3-33P01772 117 aa-2.46□□□□□ -2.8
RNU4-71P-201ENST00000516258 ISG15P05161 165 aa-2.46□□□□□ -2.8
RNU4-71P-201ENST00000516258 SMIM19Q96E16 107 aa-2.46□□□□□ -2.8
RNU4-71P-201ENST00000516258 MYO5AQ9Y4I1 1855 aaKnown RBP-2.46□□□□□ -2.8
RNU4-71P-201ENST00000516258 AFDNP55196 1824 aaKnown RBP-2.47□□□□□ -2.8
RNU4-71P-201ENST00000516258 NBDYA0A0U1RRE5 68 aa-2.47□□□□□ -2.8
RNU4-71P-201ENST00000516258 WFDC2Q14508 124 aa-2.47□□□□□ -2.8
RNU4-71P-201ENST00000516258 FXYD3Q14802 87 aa-2.47□□□□□ -2.8
RNU4-71P-201ENST00000516258 ALKAL1Q6UXT8 129 aa-2.47□□□□□ -2.8
RNU4-71P-201ENST00000516258 SYCE1Q8N0S2 351 aa-2.47□□□□□ -2.8
RNU4-71P-201ENST00000516258 C5orf56Q8N8D9 126 aa-2.47□□□□□ -2.8
RNU4-71P-201ENST00000516258 SLC25A21Q9BQT8 299 aaPredicted RBP-2.47□□□□□ -2.8
RNU4-71P-201ENST00000516258 A8MWV9 139 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 C1orf196B1AJZ1 125 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 SMLR1H3BR10 107 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 RPS3P23396 243 aaKnown RBP eCLIP-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 AP2S1P53680 142 aaPredicted RBP-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 C1orf195Q5TG92 126 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 CD200R1LQ6Q8B3 271 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 TMEM14EPQ6UXP3 125 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 FUNDC1Q8IVP5 155 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 OR51A2Q8NGJ7 313 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 CYSLTR1Q9Y271 337 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 C15orf41Q9Y2V0 281 aa-2.48□□□□□ -2.81
RNU4-71P-201ENST00000516258 IGHV3-30P01768 117 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 HLA-DRB1P01911 266 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 NMBP08949 121 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 IGHV3-30-5P0DP03 117 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 CST9Q5W186 159 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 ARPINQ7Z6K5 226 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 PDZD9Q8IXQ8 264 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 UCK1Q9HA47 277 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 C3orf18Q9UK00 162 aa-2.49□□□□□ -2.81
RNU4-71P-201ENST00000516258 TRPM7Q96QT4 1865 aa-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 NEO1Q92859 1461 aa-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 C9orf170A2RU37 121 aa-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 RPS20P60866 119 aaKnown RBP-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 ANGPT1Q15389 498 aa-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 KCTD7Q96MP8 289 aa-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 MAP1LC3AQ9H492 121 aa-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 TMEM56-RWDD3S4R434 201 aa-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 PPRC1Q5VV67 1664 aaKnown RBP-2.5□□□□□ -2.81
RNU4-71P-201ENST00000516258 A0A1B0GV50 99 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 H7BYZ3 331 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 HPGDSO60760 199 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 MPC1LP0DKB6 136 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 RPL12P30050 165 aaKnown RBP-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 DEFA1P59665 94 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 RHOBP62745 196 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 PMAIP1Q13794 54 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 SFXN4Q6P4A7 337 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 UPF3BQ9BZI7 483 aaKnown RBP-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 TMEM126AQ9H061 195 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 PRTFDC1Q9NRG1 225 aa-2.51□□□□□ -2.81
RNU4-71P-201ENST00000516258 HECW2Q9P2P5 1572 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 BIVM-ERCC5R4GMW8 1640 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 TRAV27A0A087WT01 109 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 SMIM10L2AP0DMW4 78 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 SMIM10L2BP0DMW5 78 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 COPS6Q7L5N1 327 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 C5orf17Q8NAS9 161 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 DDI1Q8WTU0 396 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 POP5Q969H6 163 aaKnown RBP-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 CYP4F30PQ9H0H9 118 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 TMEM133Q9H2Q1 129 aa-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 SPANXB1Q9NS25 103 aaPredicted RBP-2.52□□□□□ -2.81
RNU4-71P-201ENST00000516258 TNS1Q9HBL0 1735 aaKnown RBP-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 C17orf112F2Z3M2 114 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 F8VZ95 297 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 UCHL3P15374 230 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 NAA20P61599 178 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 MIR22HGQ0VDD5 57 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 SDHAF4Q5VUM1 108 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 DEFB132Q7Z7B7 95 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 MSANTD3Q96H12 275 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 C20orf27Q9GZN8 174 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 TMEM14BQ9NUH8 114 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 FBXO5Q9UKT4 447 aa-2.53□□□□□ -2.81
RNU4-71P-201ENST00000516258 URB1O60287 2271 aaKnown RBP-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 LOC101927531A0A1B0GV80 90 aa-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 EEF1E1-BLOC1S5C9J1V9 151 aa-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 NDUFS8O00217 210 aa-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 SERPINE1P05121 402 aa-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 VBP1P61758 197 aa-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 SNRPD2P62316 118 aaKnown RBP-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 KRTAP6-2Q3LI66 62 aa-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 Q5VSD8 79 aa-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 FOXI2Q6ZQN5 318 aa-2.54□□□□□ -2.82
RNU4-71P-201ENST00000516258 A0A096LPI6 279 aa-2.55□□□□□ -2.82
RNU4-71P-201ENST00000516258 M0R3E3 92 aa-2.55□□□□□ -2.82
RNU4-71P-201ENST00000516258 PSMD12O00232 456 aaPredicted RBP-2.55□□□□□ -2.82
RNU4-71P-201ENST00000516258 NDUFB3O43676 98 aa-2.55□□□□□ -2.82
RNU4-71P-201ENST00000516258 NUP155O75694 1391 aa-2.55□□□□□ -2.82
RNU4-71P-201ENST00000516258 TACC2O95359 2948 aa-2.55□□□□□ -2.82
RNU4-71P-201ENST00000516258 EDDM3AQ14507 147 aa-2.55□□□□□ -2.82
RNU4-71P-201ENST00000516258 CLVS2Q5SYC1 327 aa-2.55□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms