RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 UMAD1C9J7I0 102 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 CD300EQ496F6 205 aaPredicted RBP15.83■□□□□ 0.12
LSM6-207ENST00000515311 AKR1C8PQ5T2L2 129 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 MORN5Q5VZ52 161 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 LEMD1Q68G75 181 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 TCF24Q7RTU0 167 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 PHYHIPLQ96FC7 376 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 SLC25A22Q9H936 323 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 RPRMQ9NS64 109 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 DNHD1Q96M86 4753 aa15.83■□□□□ 0.12
LSM6-207ENST00000515311 RPL7P18124 248 aaKnown RBP15.82■□□□□ 0.12
LSM6-207ENST00000515311 TMEM61Q8N0U2 210 aa15.82■□□□□ 0.12
LSM6-207ENST00000515311 RPP25LQ8N5L8 163 aaKnown RBP15.82■□□□□ 0.12
LSM6-207ENST00000515311 A0A1W2PPV4 95 aa15.81■□□□□ 0.12
LSM6-207ENST00000515311 LCN12Q6JVE5 192 aa15.81■□□□□ 0.12
LSM6-207ENST00000515311 SIGLEC15Q6ZMC9 328 aa15.81■□□□□ 0.12
LSM6-207ENST00000515311 RBPMS2Q6ZRY4 209 aaKnown RBP15.81■□□□□ 0.12
LSM6-207ENST00000515311 MIR17HGQ75NE6 70 aa15.81■□□□□ 0.12
LSM6-207ENST00000515311 MGAM2Q2M2H8 2515 aa15.81■□□□□ 0.12
LSM6-207ENST00000515311 TSPAN4O14817 238 aa15.8■□□□□ 0.12
LSM6-207ENST00000515311 GALR1P47211 349 aa15.8■□□□□ 0.12
LSM6-207ENST00000515311 OXLD1Q5BKU9 147 aa15.8■□□□□ 0.12
LSM6-207ENST00000515311 SPATA31B1PQ5VZV4 182 aa15.8■□□□□ 0.12
LSM6-207ENST00000515311 FAM122CQ6P4D5 195 aa15.8■□□□□ 0.12
LSM6-207ENST00000515311 BPIFA4PQ86YQ2 179 aa15.8■□□□□ 0.12
LSM6-207ENST00000515311 ACTR3CQ9C0K3 210 aaPredicted RBP15.8■□□□□ 0.12
LSM6-207ENST00000515311 TRAV5A0A0B4J249 113 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 CDC34P49427 236 aaPredicted RBP15.79■□□□□ 0.12
LSM6-207ENST00000515311 TAS2R45P59539 299 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 SAMD5Q5TGI4 173 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 DPPA3Q6W0C5 159 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 STXBP6Q8NFX7 210 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 FAM167A-AS1Q96KT0 104 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 SLC25A2Q9BXI2 301 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 PLA2G2EQ9NZK7 142 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 TMEM14CQ9P0S9 112 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 SELENOKQ9Y6D0 94 aa15.79■□□□□ 0.12
LSM6-207ENST00000515311 IZUMO1RA6ND01 250 aa15.78■□□□□ 0.12
LSM6-207ENST00000515311 MRPS12O15235 138 aaKnown RBP15.78■□□□□ 0.12
LSM6-207ENST00000515311 RAB5CP51148 216 aa15.78■□□□□ 0.12
LSM6-207ENST00000515311 RPL11P62913 178 aaKnown RBP15.78■□□□□ 0.12
LSM6-207ENST00000515311 KHDC3LQ587J8 217 aa15.78■□□□□ 0.12
LSM6-207ENST00000515311 RAB24Q969Q5 203 aa15.78■□□□□ 0.12
LSM6-207ENST00000515311 SPAG8Q99932 426 aaPredicted RBP15.78■□□□□ 0.12
LSM6-207ENST00000515311 ZMAT5Q9UDW3 170 aaKnown RBP15.78■□□□□ 0.12
LSM6-207ENST00000515311 TRAV2A0A0B4J234 112 aa15.77■□□□□ 0.12
LSM6-207ENST00000515311 GP9P14770 177 aa15.77■□□□□ 0.12
LSM6-207ENST00000515311 MEOX2P50222 304 aa15.77■□□□□ 0.12
LSM6-207ENST00000515311 PAFAH1B2P68402 229 aa15.77■□□□□ 0.12
LSM6-207ENST00000515311 EGFEM1PQ0D2K5 195 aa15.77■□□□□ 0.12
LSM6-207ENST00000515311 NRN1Q9NPD7 142 aa15.77■□□□□ 0.12
LSM6-207ENST00000515311 SMAD5-AS1Q9Y6J3 95 aa15.77■□□□□ 0.12
LSM6-207ENST00000515311 A0A087X0K7 114 aa15.76■□□□□ 0.11
LSM6-207ENST00000515311 CTXND1A0A1B0GTU2 59 aa15.76■□□□□ 0.11
LSM6-207ENST00000515311 ATF4P18848 351 aaPredicted RBP15.76■□□□□ 0.11
LSM6-207ENST00000515311 SULT1A2P50226 295 aa15.76■□□□□ 0.11
LSM6-207ENST00000515311 MS4A6AQ9H2W1 248 aa15.76■□□□□ 0.11
LSM6-207ENST00000515311 CMYA5Q8N3K9 4069 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 ZNF785A8K8V0 405 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 G3V4G9 280 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 STAG3L2P0CL84 134 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 STAG3L3P0CL85 134 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 IGLC2P0DOY2 106 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 ZNF726P1Q15940 193 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 SAMD13Q5VXD3 122 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 PQLC2Q6ZP29 291 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 HRH4Q9H3N8 390 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 NBEAL1Q6ZS30 2694 aa15.75■□□□□ 0.11
LSM6-207ENST00000515311 IGKV3-7A0A075B6H7 116 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 OR4C46A6NHA9 309 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 OR7C2O60412 319 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 FHITP49789 147 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 GUCA2BQ16661 112 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 GUK1Q16774 197 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 ALKAL2Q6UX46 152 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 FAM213BQ8TBF2 198 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 DCANP1Q8TF63 244 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 PAXXQ9BUH6 204 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 OR51M1Q9H341 326 aa15.74■□□□□ 0.11
LSM6-207ENST00000515311 DNASE2O00115 360 aaPredicted RBP15.73■□□□□ 0.11
LSM6-207ENST00000515311 BEAN1Q3B7T3 259 aa15.73■□□□□ 0.11
LSM6-207ENST00000515311 SSX7Q7RTT5 188 aa15.73■□□□□ 0.11
LSM6-207ENST00000515311 GBGT1Q8N5D6 347 aa15.73■□□□□ 0.11
LSM6-207ENST00000515311 ZNF503Q96F45 646 aa15.73■□□□□ 0.11
LSM6-207ENST00000515311 C17orf77Q96MU5 243 aa15.73■□□□□ 0.11
LSM6-207ENST00000515311 ZNF256Q9Y2P7 627 aaPredicted RBP15.73■□□□□ 0.11
LSM6-207ENST00000515311 SORL1Q92673 2214 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 H3BQ15 152 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 K7EQG2 157 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 HMGB3O15347 200 aaKnown RBP15.72■□□□□ 0.11
LSM6-207ENST00000515311 ARL14EPLP0DKL9 152 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 PYYP10082 97 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 HIST1H1EP10412 219 aaKnown RBP15.72■□□□□ 0.11
LSM6-207ENST00000515311 FAM74A1Q5RGS3 127 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 KPRPQ5T749 579 aaPredicted RBP15.72■□□□□ 0.11
LSM6-207ENST00000515311 TEX261Q6UWH6 196 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 RNF141Q8WVD5 230 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 FXYD5Q96DB9 178 aa15.72■□□□□ 0.11
LSM6-207ENST00000515311 MAP1LC3B2A6NCE7 125 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms