RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 UBE2E2Q96LR5 201 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 SEC11AP67812 179 aa13.1□□□□□ -0.31
TRIM41-207ENST00000515223 GAFA1Q96PS6 74 aa13.1□□□□□ -0.31
TRIM41-207ENST00000515223 CACNA1HO95180 2353 aa13.1□□□□□ -0.31
TRIM41-207ENST00000515223 IGHV3-53P01767 116 aa13.1□□□□□ -0.31
TRIM41-207ENST00000515223 Q96MF0 132 aa13.1□□□□□ -0.31
TRIM41-207ENST00000515223 IGKV2-40A0A087WW87 121 aaPredicted RBP13.1□□□□□ -0.31
TRIM41-207ENST00000515223 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
TRIM41-207ENST00000515223 IGKV2D-40P01614 121 aaPredicted RBP13.1□□□□□ -0.31
TRIM41-207ENST00000515223 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
TRIM41-207ENST00000515223 CHTOPQ9Y3Y2 248 aaKnown RBP13.1□□□□□ -0.31
TRIM41-207ENST00000515223 RHPN1-AS1Q9BWJ2 59 aa13.1□□□□□ -0.31
TRIM41-207ENST00000515223 LY6HO94772 140 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 A0A1B0GW64 132 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 E7EQL1 145 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 H0YJW9 148 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 LINC00614P0C842 121 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 MBD3L1Q8WWY6 194 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 SSBP4Q9BWG4 385 aaPredicted RBP13.09□□□□□ -0.31
TRIM41-207ENST00000515223 TRBV24-1A0A075B6N3 115 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 NDPQ00604 133 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 KLF17Q5JT82 389 aaPredicted RBP13.09□□□□□ -0.31
TRIM41-207ENST00000515223 TYMSP04818 313 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 EVI2AP22794 236 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 DAZ1Q9NQZ3 744 aaKnown RBP13.09□□□□□ -0.31
TRIM41-207ENST00000515223 SIGLEC9Q9Y336 463 aa13.09□□□□□ -0.31
TRIM41-207ENST00000515223 A0A0U1RRA0 63 aa13.08□□□□□ -0.31
TRIM41-207ENST00000515223 GGTLC3B5MD39 225 aa13.08□□□□□ -0.31
TRIM41-207ENST00000515223 SCRT1Q9BWW7 348 aa13.08□□□□□ -0.31
TRIM41-207ENST00000515223 TREML4Q6UXN2 200 aa13.08□□□□□ -0.32
TRIM41-207ENST00000515223 OR2K2Q8NGT1 345 aa13.08□□□□□ -0.32
TRIM41-207ENST00000515223 TRAV2A0A0B4J234 112 aa13.08□□□□□ -0.32
TRIM41-207ENST00000515223 OCC1Q8TAD7 63 aa13.08□□□□□ -0.32
TRIM41-207ENST00000515223 TSKUQ8WUA8 353 aa13.08□□□□□ -0.32
TRIM41-207ENST00000515223 ZNF524Q96C55 264 aa13.08□□□□□ -0.32
TRIM41-207ENST00000515223 IGHV3-73A0A0B4J1V6 119 aa13.08□□□□□ -0.32
TRIM41-207ENST00000515223 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
TRIM41-207ENST00000515223 SYNJ2BPP57105 145 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 DERL1Q9BUN8 251 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 TRAV5A0A0B4J249 113 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 DEFB130BP0DP73 79 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 DEFB130AP0DP74 79 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 FXYD7P58549 80 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 PRR31Q5SQ13 230 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 TMEM242Q9NWH2 141 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 GGTLC1Q9BX51 225 aa13.07□□□□□ -0.32
TRIM41-207ENST00000515223 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
TRIM41-207ENST00000515223 USF3Q68DE3 2245 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 TMEM95Q3KNT9 176 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 NMSQ5H8A3 153 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 TMEM256Q8N2U0 113 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 LAMTOR2Q9Y2Q5 125 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 F8WEM9 126 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 UBE2E1P51965 193 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 MTURNQ8N3F0 131 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 OVOL3O00110 214 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 CR1LQ2VPA4 569 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 C6orf226Q5I0X4 101 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 PAX4O43316 350 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 CEACAM8P31997 349 aaPredicted RBP13.06□□□□□ -0.32
TRIM41-207ENST00000515223 ATP5L2Q7Z4Y8 100 aa13.06□□□□□ -0.32
TRIM41-207ENST00000515223 MCRIP2Q9BUT9 160 aaKnown RBP13.06□□□□□ -0.32
TRIM41-207ENST00000515223 PRR30Q53SZ7 412 aaPredicted RBP13.05□□□□□ -0.32
TRIM41-207ENST00000515223 EXOC3-AS1Q8N2X6 119 aa13.05□□□□□ -0.32
TRIM41-207ENST00000515223 RASL10AQ92737 203 aa13.05□□□□□ -0.32
TRIM41-207ENST00000515223 SRSF8Q9BRL6 282 aaKnown RBP13.05□□□□□ -0.32
TRIM41-207ENST00000515223 FNDC1Q4ZHG4 1894 aaPredicted RBP13.05□□□□□ -0.32
TRIM41-207ENST00000515223 DOCK7Q96N67 2140 aa13.05□□□□□ -0.32
TRIM41-207ENST00000515223 LYPD2Q6UXB3 125 aa13.05□□□□□ -0.32
TRIM41-207ENST00000515223 RPP25LQ8N5L8 163 aaKnown RBP13.05□□□□□ -0.32
TRIM41-207ENST00000515223 TEX43Q6ZNM6 134 aa13.05□□□□□ -0.32
TRIM41-207ENST00000515223 LAGE3Q14657 143 aa13.05□□□□□ -0.32
TRIM41-207ENST00000515223 ZNF664Q8N3J9 261 aa13.05□□□□□ -0.32
TRIM41-207ENST00000515223 CREBBPQ92793 2442 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 A0A0G2JRQ6 117 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 CA1P00915 261 aaPredicted RBP13.04□□□□□ -0.32
TRIM41-207ENST00000515223 DEFB131AP59861 70 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 ERCC8Q13216 396 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 VCYO14598 125 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 PKDREJQ9NTG1 2253 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 CFPP27918 469 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 B3GALT5-AS1P59052 145 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 ARFGEF3Q5TH69 2177 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 IGKCP01834 107 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 MAPK1IP1LQ8NDC0 245 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 C1orf159Q96HA4 380 aa13.04□□□□□ -0.32
TRIM41-207ENST00000515223 DOCK10Q96BY6 2186 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 IGKV1D-17A0A075B6S4 117 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 IGKV1-5P01602 117 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 CD300EQ496F6 205 aaPredicted RBP13.03□□□□□ -0.32
TRIM41-207ENST00000515223 SPCS1Q9Y6A9 102 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
TRIM41-207ENST00000515223 IGHV1-69DA0A0B4J2H0 117 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 J3QLI3 93 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 IGHV1-69P01742 117 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 SS18Q15532 418 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 SLC25A2Q9BXI2 301 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms