RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 BRS3P32247 399 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 SURF2Q15527 256 aaPredicted RBP2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 ANGPTL5Q86XS5 388 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 OR4K15Q8NH41 348 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 LRTM1Q9HBL6 345 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 OTORQ9NRC9 128 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 GINS2Q9Y248 185 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 RNF11Q9Y3C5 154 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 ASB4Q9Y574 426 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 LY96Q9Y6Y9 160 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 CEP192Q8TEP8 1941 aa2.12□□□□□ -2.07
CALCOCO2-222ENST00000514006 INTS1Q8N201 2190 aaKnown RBP2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 TRAV12-1A0A0B4J245 112 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 C2orf70A6NJV1 201 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 HIST1H2BKO60814 126 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 LYZL6O75951 148 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 IFNA4P05014 189 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 HIST1H2BJP06899 126 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 BCL2P10415 239 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 HBBP68871 147 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 OR9Q1Q8NGQ5 310 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 OR2T35Q8NGX2 323 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 SFT2D1Q8WV19 159 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 OR2H1Q9GZK4 316 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 CACYBPQ9HB71 228 aaKnown RBP2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 PIK3C2AO00443 1686 aa2.11□□□□□ -2.07
CALCOCO2-222ENST00000514006 COL4A5P29400 1685 aa2.1□□□□□ -2.07
CALCOCO2-222ENST00000514006 K7ERJ3 54 aa2.1□□□□□ -2.07
CALCOCO2-222ENST00000514006 S100A11P31949 105 aa2.1□□□□□ -2.07
CALCOCO2-222ENST00000514006 PDE6HQ13956 83 aa2.1□□□□□ -2.07
CALCOCO2-222ENST00000514006 PATE2Q6UY27 113 aa2.1□□□□□ -2.07
CALCOCO2-222ENST00000514006 OR5D16Q8NGK9 328 aa2.1□□□□□ -2.07
CALCOCO2-222ENST00000514006 NAT8BQ9UHF3 227 aa2.1□□□□□ -2.07
CALCOCO2-222ENST00000514006 H7BYZ3 331 aa2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 RER1O15258 196 aa2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 RPL35P42766 123 aaKnown RBP2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 EIF3IQ13347 325 aaKnown RBP2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 DEFB113Q30KQ7 82 aa2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 PHF5AQ7RTV0 110 aaKnown RBP2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 TMEM35BQ8NCS4 154 aa2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 RETNLBQ9BQ08 111 aa2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 BATF3Q9NR55 127 aa2.09□□□□□ -2.07
CALCOCO2-222ENST00000514006 MYLKQ15746 1914 aa2.09□□□□□ -2.08
CALCOCO2-222ENST00000514006 XIRP1Q702N8 1843 aaKnown RBP2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 GABARAPH6UMI1 98 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 DHFRP00374 187 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 OR10J4P0C629 311 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 RPL7P18124 248 aaKnown RBP2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 POLR2HP52434 150 aaKnown RBP2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 C10orf55Q5SWW7 151 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 C12orf29Q8N999 325 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 TMEM254Q8TBM7 123 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 CHCHD1Q96BP2 118 aaKnown RBP2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 CCDC115Q96NT0 180 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 MED31Q9Y3C7 131 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 ZFC3H1O60293 1989 aaKnown RBP2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 ARFGEF3Q5TH69 2177 aa2.08□□□□□ -2.08
CALCOCO2-222ENST00000514006 TRPM1Q7Z4N2 1603 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 C17orf112F2Z3M2 114 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 FABP2P12104 132 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 ROMO1P60602 79 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 RAB4BP61018 213 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 KLRD1Q13241 179 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 CLECL1Q8IZS7 167 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 ST6GALNAC3Q8NDV1 305 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 TCEAL2Q9H3H9 227 aaPredicted RBP2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 TRAPPC2LQ9UL33 140 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 ARHGEF11O15085 1522 aa2.07□□□□□ -2.08
CALCOCO2-222ENST00000514006 HEATR1Q9H583 2144 aaKnown RBP2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 PLXNA4Q9HCM2 1894 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 ARL5CA6NH57 179 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 KPNA4O00629 521 aaPredicted RBP2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 SDC2P34741 201 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 RAB5CP51148 216 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 NDUFA6P56556 154 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 ALX1Q15699 326 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 HRCT1Q6UXD1 115 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 ZNF563Q8TA94 476 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 POP5Q969H6 163 aaKnown RBP2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 ZC2HC1AQ96GY0 325 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 AIF1LQ9BQI0 150 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 NAA38Q9BRA0 125 aaKnown RBP2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 REG4Q9BYZ8 158 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 SPANXA1Q9NS26 97 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 TRAPPC8Q9Y2L5 1435 aa2.06□□□□□ -2.08
CALCOCO2-222ENST00000514006 SDK1Q7Z5N4 2213 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 J3QKU1 62 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 M0R233 179 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 CDK5R1Q15078 307 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 Q8N2B8 174 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 OR5D14Q8NGL3 314 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 SOX21Q9Y651 276 aaPredicted RBP2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 BCL9O00512 1426 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 FER1L6Q2WGJ9 1857 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 EXPH5Q8NEV8 1989 aa2.05□□□□□ -2.08
CALCOCO2-222ENST00000514006 IGHV1-58A0A0C4DH39 117 aa2.04□□□□□ -2.08
CALCOCO2-222ENST00000514006 LOC105371267A0A1B0GV96 52 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms