RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
VCAN-211ENST00000513984 BTF3L4Q96K17 158 aa11.62□□□□□ -0.55
VCAN-211ENST00000513984 OSTCQ9NRP0 149 aa11.62□□□□□ -0.55
VCAN-211ENST00000513984 ISLRO14498 428 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 TRGC2P03986 189 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 CLEC3BP05452 202 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 DEFB112Q30KQ8 113 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 LYPD1Q8N2G4 141 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 MS4A10Q96PG2 267 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 V9GYV3 84 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 APCP25054 2843 aa11.61□□□□□ -0.55
VCAN-211ENST00000513984 TRAV34A0A0B4J273 112 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 C5orf52A6NGY3 159 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 PPP5D1E7EU14 171 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 H3BUA1 57 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 BMPR1BO00238 502 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 PHOX2AO14813 284 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 TCRAP04437 139 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 S100A9P06702 114 aaKnown RBP11.6□□□□□ -0.55
VCAN-211ENST00000513984 S100A6P06703 90 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 PPIFP30405 207 aaKnown RBP11.6□□□□□ -0.55
VCAN-211ENST00000513984 S100A7P31151 101 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 SMIM12Q96EX1 92 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 Q96MF0 132 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 PSMG3-AS1Q96PY0 264 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 LINC00527Q9UJ94 153 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 TENM4Q6N022 2769 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 FAM3BP58499 235 aaPredicted RBP11.6□□□□□ -0.55
VCAN-211ENST00000513984 UBE2G1P62253 170 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 SNRPEP62304 92 aaKnown RBP11.6□□□□□ -0.55
VCAN-211ENST00000513984 ATP5G2Q06055 141 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 PDE6HQ13956 83 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 CLEC19AQ6UXS0 136 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 C9orf139Q6ZV77 190 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 BAGE2Q86Y30 109 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 ZNF580Q9UK33 172 aa11.6□□□□□ -0.55
VCAN-211ENST00000513984 TRAV9-1A0A075B6T8 112 aa11.59□□□□□ -0.55
VCAN-211ENST00000513984 SLC17A3O00476 420 aa11.59□□□□□ -0.55
VCAN-211ENST00000513984 BLCAPP62952 87 aa11.59□□□□□ -0.55
VCAN-211ENST00000513984 TOMM20LQ6UXN7 152 aa11.59□□□□□ -0.55
VCAN-211ENST00000513984 SIGLEC15Q6ZMC9 328 aa11.59□□□□□ -0.55
VCAN-211ENST00000513984 CREBBPQ92793 2442 aa11.59□□□□□ -0.55
VCAN-211ENST00000513984 AP4M1O00189 453 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 IGHV4-59P01825 116 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 TRGV3P03979 118 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 MGST1P10620 155 aaKnown RBP11.58□□□□□ -0.56
VCAN-211ENST00000513984 RPL7P18124 248 aaKnown RBP11.58□□□□□ -0.56
VCAN-211ENST00000513984 IER3P46695 156 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 EXOC3-AS1Q8N2X6 119 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 C17orf77Q96MU5 243 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 RNASE7Q9H1E1 156 aaKnown RBP11.58□□□□□ -0.56
VCAN-211ENST00000513984 RPH3ALQ9UNE2 315 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 ZANQ9Y493 2812 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 UBE2CO00762 179 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
VCAN-211ENST00000513984 IBA57Q5T440 356 aaKnown RBP11.58□□□□□ -0.56
VCAN-211ENST00000513984 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 NHLRC2Q8NBF2 726 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 CMTM2Q8TAZ6 248 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 NOL4LQ96MY1 436 aaPredicted RBP11.58□□□□□ -0.56
VCAN-211ENST00000513984 GPR82Q96P67 336 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
VCAN-211ENST00000513984 IGHV3-35A0A0C4DH35 117 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 LTAP01374 205 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 RAB9AP51151 201 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 RELQ04864 619 aaPredicted RBP11.57□□□□□ -0.56
VCAN-211ENST00000513984 RPEL1Q2QD12 228 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 Q6ZS46 218 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 OR5R1Q8NH85 324 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 FRZBQ92765 325 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 MLST8Q9BVC4 326 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 GNB4Q9HAV0 340 aa11.57□□□□□ -0.56
VCAN-211ENST00000513984 TRBV6-1A0A0K0K1D8 114 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 ZNF320A2RRD8 509 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 CLPSL1A2RUU4 121 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 TRGC1P0CF51 173 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 TPPP2P59282 170 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 CFHR3Q02985 330 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 SMUG1Q53HV7 270 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 ACTL10Q5JWF8 245 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 CYB5R2Q6BCY4 276 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 OR8I2Q8N0Y5 310 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 USMG5Q96IX5 58 aa11.56□□□□□ -0.56
VCAN-211ENST00000513984 ZNF253O75346 499 aa11.55□□□□□ -0.56
VCAN-211ENST00000513984 IGLV1-40P01703 118 aa11.55□□□□□ -0.56
VCAN-211ENST00000513984 IGLV2-11P01706 119 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms