RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SLC39A9Q9NUM3 307 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 HIGD1AQ9Y241 93 aa7.34□□□□□ -1.23
TOPBP1-209ENST00000513818 ZNF98A6NK75 572 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 TSPAN4O14817 238 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 TNFRSF6BO95407 300 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SCGB1D1O95968 90 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 CFDP00746 253 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 IFNA5P01569 189 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SNRPCP09234 159 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 CXCL2P19875 107 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 BMI1P35226 326 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 RAB31Q13636 194 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 ZNF124Q15973 351 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SPATA31B1PQ5VZV4 182 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 RPL7L1Q6DKI1 246 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 LAMTOR1Q6IAA8 161 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SIGLEC15Q6ZMC9 328 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 HSD17B11Q8NBQ5 300 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 TMEM37Q8WXS4 190 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SPAG8Q99932 426 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 NEURL2Q9BR09 285 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SLC25A39Q9BZJ4 359 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 MFFQ9GZY8 342 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SH3BGRL3Q9H299 93 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 MS4A6AQ9H2W1 248 aa7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SEPSECSQ9HD40 501 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-209ENST00000513818 SORL1Q92673 2214 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 TRAV5A0A0B4J249 113 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 TRAV25A0A0B4J276 109 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 MPDU1O75352 247 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 RPL29P47914 159 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 PLP1P60201 277 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 ODF3L2Q3SX64 289 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 FFAR4Q5NUL3 377 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 GTSCR1Q86UQ5 136 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 TCTE3Q8IZS6 198 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 OR8I2Q8N0Y5 310 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 Q8N1Y9 231 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 DEFB125Q8N687 156 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 ZNF709Q8N972 641 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 SCGB1C1Q8TD33 95 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 SHANK2-AS3Q9BTD1 123 aa7.32□□□□□ -1.24
TOPBP1-209ENST00000513818 ELOA3CA0A087WX78 387 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 OR4C46A6NHA9 309 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 H3BTX0 84 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 DNASE2O00115 360 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 ZNF688P0C7X2 276 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 PRB4P10163 310 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 ATP6V0CP27449 155 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 ZNF266Q14584 549 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 DEFB121Q5J5C9 76 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 C10orf113Q5VZT2 155 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 Q6ZRG5 221 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 MIR17HGQ75NE6 70 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 APRG1Q8IVJ8 170 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 MAP6D1Q9H9H5 199 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 CYTL1Q9NRR1 136 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 C19orf73Q9NVV2 129 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 SMAD5-AS1Q9Y6J3 95 aa7.31□□□□□ -1.24
TOPBP1-209ENST00000513818 HELTA6NFD8 242 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 C17orf112F2Z3M2 114 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 K7EQG2 157 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 IGHV4-30-4P0DP06 118 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 DEFB1P60022 68 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 RAB2AP61019 212 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 IGFL4Q6B9Z1 124 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 KCNRGQ8N5I3 272 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 OR1L4Q8NGR5 311 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 DCANP1Q8TF63 244 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 C17orf77Q96MU5 243 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 KCNIP2Q9NS61 270 aa7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 ZMAT5Q9UDW3 170 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-209ENST00000513818 HMSDA8MTL9 139 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 OR11H12B2RN74 326 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 MRPS12O15235 138 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 BCL2L11O43521 198 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 C1QBP02746 253 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 NKX2-5P52952 324 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 DEFB131AP59861 70 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 ZNF345Q14585 488 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 C1orf194Q5T5A4 169 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 PXDC1Q5TGL8 231 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 FAM78BQ5VT40 261 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 FAM122CQ6P4D5 195 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 PFDN5Q99471 154 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 PARD6GQ9BYG4 376 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 SRD5A3Q9H8P0 318 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 DNAJC4Q9NNZ3 241 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 NRN1Q9NPD7 142 aa7.29□□□□□ -1.24
TOPBP1-209ENST00000513818 KANTRA0A1W2PQU2 76 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 KNCNA6PVL3 124 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 SOCS3O14543 225 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 HMGB3O15347 200 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 PFDN1O60925 122 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 FRMD6-AS1P0C7T7 363 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 PYYP10082 97 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 HLA-DMBP28068 263 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 GALR1P47211 349 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms