RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 OR2T35Q8NGX2 323 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 OR13C6PQ8NH95 151 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 CDC26Q8NHZ8 85 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 PATE1Q8WXA2 126 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 AP3S1Q92572 193 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 MALSU1Q96EH3 234 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 TP53RKQ96S44 253 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 LYSMD1Q96S90 227 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 AMELYQ99218 206 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 GINS3Q9BRX5 216 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 OR2J1Q9GZK6 312 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 IL20Q9NYY1 176 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 SSR3Q9UNL2 185 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 LY96Q9Y6Y9 160 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 KDM6AO15550 1401 aaPredicted RBP0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 TNS3Q68CZ2 1445 aa0.44□□□□□ -2.34
TRAPPC11-210ENST00000513600 MCM3APO60318 1980 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 EML5Q05BV3 1969 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 NINQ8N4C6 2090 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 A0A087WSZ3 146 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 TRAV5A0A0B4J249 113 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 TRBV6-4A0A1B0GX49 114 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 RIIAD1A6NNX1 92 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 C17orf112F2Z3M2 114 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 BANF1O75531 89 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 APOA2P02652 100 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 CRHP06850 196 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 OR10J4P0C629 311 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 FAM74A1Q5RGS3 127 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 PATE2Q6UY27 113 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 C4orf22Q6V702 233 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 ZNF833PQ6ZTB9 187 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 ST6GALNAC3Q8NDV1 305 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 NUP35Q8NFH5 326 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 PRRT1Q99946 306 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 PAIP2Q9BPZ3 127 aaKnown RBP0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 PBDC1Q9BVG4 233 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 CCDC94Q9BW85 323 aaPredicted RBP0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 NPCDR1Q9BY65 106 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 BOLA2Q9H3K6 86 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 POPDC3Q9HBV1 291 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 CDC42SE1Q9NRR8 79 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 MED29Q9NX70 200 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 PCTPQ9UKL6 214 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 LAMA4Q16363 1823 aa0.43□□□□□ -2.34
TRAPPC11-210ENST00000513600 ZNF462Q96JM2 2506 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 SPAG17Q6Q759 2223 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 MYH2Q9UKX2 1941 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 MUC4Q99102 2169 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 UHRF1BP1Q6BDS2 1440 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 TRAV10A0A0B4J240 114 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 IGHV1-58A0A0C4DH39 117 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 TLCD2A6NGC4 264 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 TMEM238C9JI98 176 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 E5RI56 91 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 CCL25O15444 150 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 MFSD11O43934 449 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 NUPR1O60356 82 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 PIAS1O75925 651 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 IFNA14P01570 189 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 ZNF25P17030 456 aaPredicted RBP0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 OGNP20774 298 aaKnown RBP0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 GNG3P63215 75 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 PSG9Q00887 426 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 KRTAP26-1Q6PEX3 210 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 OR5D14Q8NGL3 314 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 ZNF431Q8TF32 576 aaPredicted RBP0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 BORCS5Q969J3 196 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 LINC00052Q96N35 136 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 GPX7Q96SL4 187 aaPredicted RBP0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 RTL8AQ9BWD3 113 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 ORMDL1Q9P0S3 153 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 TMEM14CQ9P0S9 112 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 SS18L2Q9UHA2 77 aa0.42□□□□□ -2.34
TRAPPC11-210ENST00000513600 CASP8AP2Q9UKL3 1982 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 NUP98P52948 1817 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 ALPK3Q96L96 1907 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 TRAV27A0A087WT01 109 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 IGLV3-32A0A0A0MS00 114 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 B4DSR2 109 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 ERC2-IT1O76042 136 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 IGLV1-51P01701 117 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 TRGC2P03986 189 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 IFNA4P05014 189 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 CXCL8P10145 99 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 PPP1R2P41236 205 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 RAB5CP51148 216 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 INSL3P51460 131 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 ARPP19P56211 112 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 TCTAP57738 103 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 TAS2R41P59536 307 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 CDK6Q00534 326 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 SNCBQ16143 134 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 C1orf134Q5TEV5 83 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 C1orf140Q5VVS0 124 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 LINC00322Q6ZN03 302 aaPredicted RBP0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 PHF5AQ7RTV0 110 aaKnown RBP0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 GRINAQ7Z429 371 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 IFT20Q8IY31 132 aa0.41□□□□□ -2.34
TRAPPC11-210ENST00000513600 SMIM20Q8N5G0 67 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms