RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 C10orf99Q6UWK7 81 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 GLIPR1L1Q6UWM5 242 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 LRRC25Q8N386 305 aaPredicted RBP-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 OR2T10Q8NGZ9 312 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 RAB8BQ92930 207 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 SLAMF6Q96DU3 332 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 C19orf60Q96EN9 201 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 TP53RKQ96S44 253 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 GPER1Q99527 375 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 HIST1H2BLQ99880 126 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 NIPSNAP1Q9BPW8 284 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 CHMP4BQ9H444 224 aaKnown RBP-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 PRTFDC1Q9NRG1 225 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 FGFR1OP2Q9NVK5 253 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 PKIGQ9Y2B9 76 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 CNOT1A5YKK6 2376 aaKnown RBP-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 WNK1Q9H4A3 2382 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 FREM2Q5SZK8 3169 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 DMDP11532 3685 aa-0.22□□□□□ -2.44
PDGFC-208ENST00000512711 MUC3AQ02505 3323 aa-0.22□□□□□ -2.45
PDGFC-208ENST00000512711 COL14A1Q05707 1796 aaKnown RBP-0.22□□□□□ -2.45
PDGFC-208ENST00000512711 SZT2Q5T011 3432 aa-0.22□□□□□ -2.45
PDGFC-208ENST00000512711 RELNP78509 3460 aa-0.22□□□□□ -2.45
PDGFC-208ENST00000512711 SBF1O95248 1867 aa-0.22□□□□□ -2.45
PDGFC-208ENST00000512711 MYH7BA7E2Y1 1941 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 PTPRFP10586 1907 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 PLXND1Q9Y4D7 1925 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 CADP27708 2225 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 URB1O60287 2271 aaKnown RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 A0A087X0T9 212 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 TRAV10A0A0B4J240 114 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 JMJD7-PLA2G4BH0Y9G9 81 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 M0QZ92 97 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 PSMD12O00232 456 aaPredicted RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 GPR31O00270 319 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 CXCR6O00574 342 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 TIMM17BO60830 172 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 OR2J2O76002 312 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 TNNC2P02585 160 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 COX5BP10606 129 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 CCL4P13236 92 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 CASP1P29466 404 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 MAGEA2P43356 314 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 RPL5P46777 297 aaKnown RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 HADHBP55084 474 aaKnown RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 FXYD4P59646 89 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 RPS20P60866 119 aaKnown RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 YPEL3P61236 119 aaPredicted RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 SNRPD2P62316 118 aaKnown RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 DYNLT1P63172 113 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 TSNQ15631 228 aaKnown RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 SPOPLQ6IQ16 392 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 LRRN1Q6UXK5 716 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 C4orf22Q6V702 233 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 Q6ZQY7 126 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 LYG2Q86SG7 212 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 PRR15Q8IV56 129 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 Q8IYB0 196 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 C20orf196Q8IYI0 205 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 KRT222Q8N1A0 295 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 GDPD1Q8N9F7 314 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 SLC30A7Q8NEW0 376 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 OR5D14Q8NGL3 314 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 PIGXQ8TBF5 258 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 WFDC5Q8TCV5 224 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 ZNF75CPQ92670 426 aaPredicted RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 PPP1R2P1Q96PQ5 205 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 SPRR2FQ96RM1 72 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 DRC3Q9H069 523 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 IDI2-AS1Q9NZ38 188 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 OPTCQ9UBM4 332 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 OR52A1Q9UKL2 312 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 PCTPQ9UKL6 214 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 RNF11Q9Y3C5 154 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 LSM5Q9Y4Y9 91 aaKnown RBP-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 TMEM56-RWDD3S4R434 201 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 SIP14410 1827 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 RAD50Q92878 1312 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 DNAH14Q0VDD8 3507 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 USP34Q70CQ2 3546 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 TNS3Q68CZ2 1445 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 CECR2Q9BXF3 1484 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 VCANP13611 3396 aa-0.23□□□□□ -2.45
PDGFC-208ENST00000512711 CEP290O15078 2479 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 PLXNA4Q9HCM2 1894 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 IQCF5A8MTL0 148 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 H0Y980 276 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 PIRO00625 290 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 CALUO43852 315 aaPredicted RBP-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 ERC2-IT1O76042 136 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 SERPINE1P05121 402 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 COX7CP15954 63 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 SPCS3P61009 180 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 SKP1P63208 163 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 RBM3P98179 157 aaKnown RBP-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 LELP1Q5T871 98 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 OGFRL1Q5TC84 451 aaPredicted RBP-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 SFXN4Q6P4A7 337 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 ALKAL1Q6UXT8 129 aa-0.24□□□□□ -2.45
PDGFC-208ENST00000512711 ZNF431Q8TF32 576 aaPredicted RBP-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms