RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 SH3BGRL3Q9H299 93 aa4.37□□□□□ -1.71
RNF4-217ENST00000511892 TUBA4BQ9H853 241 aa4.37□□□□□ -1.71
RNF4-217ENST00000511892 TREM1Q9NP99 234 aa4.37□□□□□ -1.71
RNF4-217ENST00000511892 TECRQ9NZ01 308 aaKnown RBP4.37□□□□□ -1.71
RNF4-217ENST00000511892 WDR83OSQ9Y284 106 aa4.37□□□□□ -1.71
RNF4-217ENST00000511892 OR51B2Q9Y5P1 312 aa4.37□□□□□ -1.71
RNF4-217ENST00000511892 F11RQ9Y624 299 aaKnown RBP4.37□□□□□ -1.71
RNF4-217ENST00000511892 VPS13DQ5THJ4 4388 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 AGRNO00468 2067 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 IGHV3-21A0A0B4J1V1 117 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 IGHV3-35A0A0C4DH35 117 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 UBE2L5PA0A1B0GUS4 154 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 OR2T8A6NH00 312 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 K7EIM0 57 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 SNAPINO95295 136 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 IFNA1P01562 189 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 IFNA4P05014 189 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 FGF7P21781 194 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 PPT1P50897 306 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 SUB1P53999 127 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNF4-217ENST00000511892 ERHP84090 104 aaKnown RBP4.36□□□□□ -1.71
RNF4-217ENST00000511892 RAB31Q13636 194 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 GUK1Q16774 197 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 BSXQ3C1V8 233 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 ACOT6Q3I5F7 207 aaPredicted RBP4.36□□□□□ -1.71
RNF4-217ENST00000511892 FAM106AQ4KMX7 169 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 TMEM61Q8N0U2 210 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 OR10G4Q8NGN3 311 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 NARS2Q96I59 477 aaKnown RBP4.36□□□□□ -1.71
RNF4-217ENST00000511892 SPATA25Q9BR10 227 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 CHRDL1Q9BU40 450 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 HINT2Q9BX68 163 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 ACTR3CQ9C0K3 210 aaPredicted RBP4.36□□□□□ -1.71
RNF4-217ENST00000511892 NPVFQ9HCQ7 196 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 RETNQ9HD89 108 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 THYN1Q9P016 225 aa4.36□□□□□ -1.71
RNF4-217ENST00000511892 DNAH10Q8IVF4 4471 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 CTXND1A0A1B0GTU2 59 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 OR11H12B2RN74 326 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 PRSS46E5RG02 174 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 F8W036 122 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 I3L2K1 104 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 CYB5BO43169 146 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 TGOLN2O43493 480 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 APOC3P02656 99 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 GPX4P36969 197 aaPredicted RBP4.35□□□□□ -1.71
RNF4-217ENST00000511892 OPRK1P41145 380 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 ELLP55199 621 aaPredicted RBP4.35□□□□□ -1.71
RNF4-217ENST00000511892 GUCA2BQ16661 112 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 KHDC3LQ587J8 217 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 ZNF506Q5JVG8 444 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 SPSB3Q6PJ21 355 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 OR1P1Q8NH06 330 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 SUN5Q8TC36 379 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 RNASEH2CQ8TDP1 164 aaKnown RBP4.35□□□□□ -1.71
RNF4-217ENST00000511892 SFT2D1Q8WV19 159 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 TMEM190Q8WZ59 177 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 TXNDC17Q9BRA2 123 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 RSG1Q9BU20 258 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 NPCDR1Q9BY65 106 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 SLC35B3Q9H1N7 401 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 SRD5A3Q9H8P0 318 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 RPRMQ9NS64 109 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 SLC39A9Q9NUM3 307 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 GAR1Q9NY12 217 aaKnown RBP4.35□□□□□ -1.71
RNF4-217ENST00000511892 MRPL27Q9P0M9 148 aaKnown RBP4.35□□□□□ -1.71
RNF4-217ENST00000511892 HECTD4Q9Y4D8 3996 aa4.35□□□□□ -1.71
RNF4-217ENST00000511892 IGHV3OR16-8A0A075B7F1 116 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 RBFOX3A6NFN3 312 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 CORTO00230 105 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
RNF4-217ENST00000511892 CTSGP08311 255 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 SFTA3P0C7M3 94 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 RNASE2P10153 161 aaKnown RBP4.34□□□□□ -1.71
RNF4-217ENST00000511892 RPL29P47914 159 aaKnown RBP4.34□□□□□ -1.71
RNF4-217ENST00000511892 FHITP49789 147 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 SPINK9Q5DT21 86 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 FFAR4Q5NUL3 377 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 PVRIGQ6DKI7 326 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 ZFAND6Q6FIF0 208 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 ETFRF1Q6IPR1 90 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 TEPPQ6URK8 271 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 TMEM144Q7Z5S9 345 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 WFDC3Q8IUB2 231 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 ZNF114Q8NC26 417 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 OR1L6Q8NGR2 347 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 SLC35E1Q96K37 410 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 ATP6V0BQ99437 205 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 FAM110AQ9BQ89 295 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 SCRT1Q9BWW7 348 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 NKX6-2Q9C056 277 aaPredicted RBP4.34□□□□□ -1.71
RNF4-217ENST00000511892 EIF5A2Q9GZV4 153 aaKnown RBP4.34□□□□□ -1.71
RNF4-217ENST00000511892 MANBALQ9NQG1 85 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 C21orf62Q9NYP8 219 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 UFC1Q9Y3C8 167 aa4.34□□□□□ -1.71
RNF4-217ENST00000511892 TRAV25A0A0B4J276 109 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 LOC102723971A0A1B0GUV8 181 aa4.33□□□□□ -1.72
RNF4-217ENST00000511892 SMCO3A2RU48 225 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms