RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 HELZP42694 1942 aaKnown RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 TRBV25-1A0A075B6N4 114 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 TRAV25A0A0B4J276 109 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 SAA4P35542 130 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 RNASE7Q9H1E1 156 aaKnown RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 PLSCR4Q9NRQ2 329 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 ALPK2Q86TB3 2170 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 J3QRE1 110 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 MMP23AO75900 390 aa4.75□□□□□ -1.65
USP38-203ENST00000511739 NPDC1Q9NQX5 325 aaPredicted RBP4.75□□□□□ -1.65
USP38-203ENST00000511739 IGLV3-32A0A0A0MS00 114 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 CCL20P78556 96 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 HEPN1Q6WQI6 88 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 DEPPQ9NTK1 212 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 COL4A4P53420 1690 aaPredicted RBP4.74□□□□□ -1.65
USP38-203ENST00000511739 H3BUT2 72 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 LMO1P25800 156 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 ACACAQ13085 2346 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 TRAV9-1A0A075B6T8 112 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 A0A1B0GWJ7 208 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 GAGE12BA1L429 117 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 PIN1P1O15428 100 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 GAGE7O76087 117 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 GAGE12FP0CL80 117 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 GAGE12GP0CL81 117 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 GAGE12IP0CL82 117 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 C4orf48Q5BLP8 95 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 ZNF497Q6ZNH5 498 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 NIT1Q86X76 327 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 NABP1Q96AH0 204 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 TRBV6-7A0A0A0MS04 114 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 A0A1W2PRE2 83 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 TGFBR3LH3BV60 316 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 CD5LO43866 347 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 SUPT4H1P63272 117 aaKnown RBP4.74□□□□□ -1.65
USP38-203ENST00000511739 C10orf55Q5SWW7 151 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 PUSL1Q8N0Z8 303 aaKnown RBP4.74□□□□□ -1.65
USP38-203ENST00000511739 IFI27L1Q96BM0 104 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 DERL1Q9BUN8 251 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 IGKV1D-43A0A0B4J1Z2 117 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 LY6HO94772 140 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 KLF17Q5JT82 389 aaPredicted RBP4.74□□□□□ -1.65
USP38-203ENST00000511739 RUSC1-AS1Q66K80 236 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 MDS2Q8NDY4 140 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 CLDN16Q9Y5I7 305 aa4.74□□□□□ -1.65
USP38-203ENST00000511739 IGKV2D-24A0A075B6R9 120 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 GAS1P54826 345 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 PAX9P55771 341 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 RFNGQ9Y644 331 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 IGKV1OR2-108A0A075B7D4 117 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 PINLYPA6NC86 204 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 A6NNC1 897 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 DDTP30046 118 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 DUTP33316 252 aaKnown RBP4.73□□□□□ -1.65
USP38-203ENST00000511739 LHFPL4Q7Z7J7 247 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 LY6G5BQ8NDX9 201 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 TMEM158Q8WZ71 300 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 CSTL1Q9H114 145 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 A0A087WWL8 130 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 KNCNA6PVL3 124 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 RHODO00212 210 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 CD300CQ08708 224 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 FOXL1Q12952 345 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 TMEM155Q4W5P6 130 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 ZNF362Q5T0B9 420 aaPredicted RBP4.73□□□□□ -1.65
USP38-203ENST00000511739 AZU1P20160 251 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 COL8A2P25067 703 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 PMVKQ15126 192 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 C14orf178Q8N769 122 aaPredicted RBP4.73□□□□□ -1.65
USP38-203ENST00000511739 SCRT1Q9BWW7 348 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 BUB1B-PAK6H3BSN5 160 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 NTN3O00634 580 aaPredicted RBP4.73□□□□□ -1.65
USP38-203ENST00000511739 TIMM21Q9BVV7 248 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 SMPXQ9UHP9 88 aa4.73□□□□□ -1.65
USP38-203ENST00000511739 CACNA1IQ9P0X4 2223 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 SRRM5B3KS81 715 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 K7ENP7 123 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 RAMP3O60896 148 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 SELLP14151 372 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 C1orf122Q6ZSJ8 110 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 Q9HAA7 133 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 LTBP2Q14767 1821 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 IGHV3-16A0A0C4DH30 117 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 A8MXK9 166 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 NCR2O95944 276 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 C1QTNF9P0C862 333 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 PFN2P35080 140 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 RPL23P62829 140 aaKnown RBP4.72□□□□□ -1.65
USP38-203ENST00000511739 IL17RELQ6ZVW7 336 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 EXOC3-AS1Q8N2X6 119 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 SPXQ9BT56 116 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 ZNF98A6NK75 572 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 J3QLI3 93 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 TCRAP04437 139 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 NMBP08949 121 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 IGF2BP2-AS1Q96M15 143 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 LIME1Q9H400 295 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 OSTCQ9NRP0 149 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 FBLN5Q9UBX5 448 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 CRLF1O75462 422 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms