RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 FAM209BQ5JX69 171 aa12.85□□□□□ -0.35
CXCL3-204ENST00000511669 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
CXCL3-204ENST00000511669 SPTAN1Q13813 2472 aaKnown RBP12.85□□□□□ -0.35
CXCL3-204ENST00000511669 TRBV6-1A0A0K0K1D8 114 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 SH2D7A6NKC9 451 aaPredicted RBP12.84□□□□□ -0.35
CXCL3-204ENST00000511669 S100A8P05109 93 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 GNG5P63218 68 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 OR5I1Q13606 314 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 MS4A10Q96PG2 267 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 SERTAD4Q9NUC0 356 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 V9GYV3 84 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 MED13LQ71F56 2210 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 MYO18BQ8IUG5 2567 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 A0A0G2JLM5 398 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 FBLL1A6NHQ2 334 aaKnown RBP12.84□□□□□ -0.35
CXCL3-204ENST00000511669 ZNF705GA8MUZ8 300 aaPredicted RBP12.84□□□□□ -0.35
CXCL3-204ENST00000511669 GATCO43716 136 aaKnown RBP12.84□□□□□ -0.35
CXCL3-204ENST00000511669 ZNF253O75346 499 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 IGLV2-8P01709 118 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 COL8A1P27658 744 aa12.84□□□□□ -0.35
CXCL3-204ENST00000511669 UBR5O95071 2799 aaPredicted RBP12.83□□□□□ -0.36
CXCL3-204ENST00000511669 LINC01548A6NM66 108 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BKO60814 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 AVPP01185 164 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BJP06899 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 SNRPCP09234 159 aaKnown RBP12.83□□□□□ -0.36
CXCL3-204ENST00000511669 TRGC1P0CF51 173 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BOP23527 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BBP33778 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 ADMP35318 185 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 MEOX2P50222 304 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 NDUFA6P56556 154 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BDP58876 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 TPPP2P59282 170 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BCP62807 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST2H2BEQ16778 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.83□□□□□ -0.36
CXCL3-204ENST00000511669 C1orf194Q5T5A4 169 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 CYB5R2Q6BCY4 276 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BHQ93079 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 DAZAP1Q96EP5 407 aaKnown RBP12.83□□□□□ -0.36
CXCL3-204ENST00000511669 ZNF414Q96IQ9 312 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 METTL26Q96S19 204 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BNQ99877 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 HIST1H2BMQ99879 126 aa12.83□□□□□ -0.36
CXCL3-204ENST00000511669 TRAV34A0A0B4J273 112 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 SLC17A3O00476 420 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 MRPS12O15235 138 aaKnown RBP12.82□□□□□ -0.36
CXCL3-204ENST00000511669 LTAP01374 205 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 PLA2G2AP14555 144 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 TOMM20LQ6UXN7 152 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 C9orf139Q6ZV77 190 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 TMEM75Q8N9X5 138 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 LINC00479Q96M42 142 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 CCDC140Q96MF4 163 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 RNASE7Q9H1E1 156 aaKnown RBP12.82□□□□□ -0.36
CXCL3-204ENST00000511669 TRAPPC1Q9Y5R8 145 aa12.82□□□□□ -0.36
CXCL3-204ENST00000511669 H3BTX0 84 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 KRTAP10-9P60411 292 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 DEFB112Q30KQ8 113 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 ACTL10Q5JWF8 245 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 WDR73Q6P4I2 378 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 SIGLEC15Q6ZMC9 328 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 FRZBQ92765 325 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 Q96MF0 132 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 ZNF492Q9P255 531 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 ZFP30Q9Y2G7 519 aa12.81□□□□□ -0.36
CXCL3-204ENST00000511669 MT-ND6P03923 174 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 GOLT1AQ6ZVE7 132 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 EXOC3-AS1Q8N2X6 119 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 ZFAND3Q9H8U3 227 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 TACC2O95359 2948 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 FLNCQ14315 2725 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 HOXA5P20719 270 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 ARL3P36405 182 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 Q86TA4 180 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 TMEM183AQ8IXX5 376 aa12.8□□□□□ -0.36
CXCL3-204ENST00000511669 IER3P46695 156 aa12.79□□□□□ -0.36
CXCL3-204ENST00000511669 CDX1P47902 265 aaPredicted RBP12.79□□□□□ -0.36
CXCL3-204ENST00000511669 SMUG1Q53HV7 270 aa12.79□□□□□ -0.36
CXCL3-204ENST00000511669 CT83Q5H943 113 aa12.79□□□□□ -0.36
CXCL3-204ENST00000511669 PRR27Q6MZM9 219 aa12.79□□□□□ -0.36
CXCL3-204ENST00000511669 NHLRC2Q8NBF2 726 aa12.79□□□□□ -0.36
CXCL3-204ENST00000511669 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
CXCL3-204ENST00000511669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.78□□□□□ -0.36
CXCL3-204ENST00000511669 A0A087X0K7 114 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 SMIM27A0A1W2PRY6 76 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 TMEM89A2RUT3 159 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 ZNF785A8K8V0 405 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 FSHBP01225 129 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 P01737 135 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 PF4V1P10720 104 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 S100A2P29034 98 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 PPIFP30405 207 aaKnown RBP12.78□□□□□ -0.36
CXCL3-204ENST00000511669 RASL11AQ6T310 242 aa12.78□□□□□ -0.36
CXCL3-204ENST00000511669 MLST8Q9BVC4 326 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms