RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 TMEM128Q5BJH2 165 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 IGSF11Q5DX21 431 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 OR4C5Q8NGB2 326 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 NPIPB3Q92617 1050 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 TMEM167BQ9NRX6 74 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 LY96Q9Y6Y9 160 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 HLA-DRB4X5D2U9 266 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 LAMA5O15230 3695 aa2.14□□□□□ -2.07
CLOCK-209ENST00000511124 TRAV21A0A0B4J279 112 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 F8VVB4 439 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 F8VWA3 439 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 FCN1O00602 326 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 UBE2L6O14933 153 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 SIVA1O15304 175 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 NMBP08949 121 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 GZMBP10144 247 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 UBE2G1P62253 170 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 RPL30P62888 115 aaKnown RBP2.13□□□□□ -2.07
CLOCK-209ENST00000511124 PSG3Q16557 428 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 Q6ZNX1 250 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 INO80EQ8NBZ0 244 aaPredicted RBP2.13□□□□□ -2.07
CLOCK-209ENST00000511124 RPUSD4Q96CM3 377 aaKnown RBP2.13□□□□□ -2.07
CLOCK-209ENST00000511124 TPSG1Q9NRR2 321 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 NDUFA4L2Q9NRX3 87 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 IGHV4-28A0A0C4DH34 117 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 IGHV3-35A0A0C4DH35 117 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 EPM2AB3EWF7 344 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 G0S2P27469 103 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 CAMLGP49069 296 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 KRTAP10-11P60412 298 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 PDE6HQ13956 83 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 RHOHQ15669 191 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 VWC2Q2TAL6 325 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 DHRS11Q6UWP2 260 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 IDO2Q6ZQW0 420 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 Q6ZS46 218 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 MRGPRFQ96AM1 343 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 ODF3Q96PU9 254 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 OVOL2Q9BRP0 275 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 KCNK15Q9H427 330 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 PRO0255Q9UI72 69 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 LENEPQ9Y5L5 61 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 KIAA2026Q5HYC2 2103 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 HIVEP1P15822 2718 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 TRBV7-9A0A0J9YWB2 115 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 TMEM213A2RRL7 107 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 MFSD2BA6NFX1 497 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 K7EQG2 157 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 S100A8P05109 93 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 LINC00869P0C866 280 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 POLR2IP36954 125 aaKnown RBP2.13□□□□□ -2.07
CLOCK-209ENST00000511124 UBE2G2P60604 165 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 RPS20P60866 119 aaKnown RBP2.13□□□□□ -2.07
CLOCK-209ENST00000511124 RPL36AP83881 106 aaKnown RBP2.13□□□□□ -2.07
CLOCK-209ENST00000511124 KHDC3LQ587J8 217 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 DGAT2L7PQ6IED9 249 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 CGB2Q6NT52 195 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 CYP2G1PQ6ZSU1 146 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 LYPD1Q8N2G4 141 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 Q8N976 141 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 TMEM263Q8WUH6 116 aaKnown RBP2.13□□□□□ -2.07
CLOCK-209ENST00000511124 RPL36ALQ969Q0 106 aaKnown RBP2.13□□□□□ -2.07
CLOCK-209ENST00000511124 ISOC2Q96AB3 205 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 CCDC140Q96MF4 163 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 DNAJC4Q9NNZ3 241 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 CLEC2DQ9UHP7 191 aa2.13□□□□□ -2.07
CLOCK-209ENST00000511124 TRGV1A0A0A0MS02 117 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 TCAPO15273 167 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 OR7C2O60412 319 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 PITX3O75364 302 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 FCN3O75636 299 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 NXPH4O95158 308 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 IGKV3-20P01619 116 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 AMY1AP04745 511 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 TPT1P13693 172 aaKnown RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 CRYBB3P26998 211 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 AARDQ4LEZ3 155 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 AKR1C8PQ5T2L2 129 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 MORN5Q5VZ52 161 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 AMMECR1LQ6DCA0 310 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 IL34Q6ZMJ4 242 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 MAFIPQ8WZ33 124 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 SSBP4Q9BWG4 385 aaPredicted RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 TMEM222Q9H0R3 208 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 VSIRQ9H7M9 311 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 EDA2RQ9HAV5 297 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 MTFP1Q9UDX5 166 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 ANK3Q12955 4377 aaKnown RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 IGHV3-49A0A0A0MS15 119 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 SSNA1O43805 119 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 ZNF253O75346 499 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 DEDDO75618 318 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 KRTAP10-3P60369 221 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 LGALSLQ3ZCW2 172 aaPredicted RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 PQLC2Q6ZP29 291 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 CHCHD7Q9BUK0 85 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 WDR61Q9GZS3 305 aaKnown RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 MIXL1Q9H2W2 232 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 FNDC4Q9H6D8 234 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms