RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 TIMM23O14925 209 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 NDUFS7O75251 213 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 RBMY1CP0DJD4 496 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 ADCYAP1P18509 176 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 PFN2P35080 140 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 LHFPL1Q86WI0 220 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 ANKRD29Q8N6D5 301 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 KCTD12Q96CX2 325 aaKnown RBP7.59□□□□□ -1.19
USP53-207ENST00000510852 SPIN2AQ99865 258 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 SPIN2BQ9BPZ2 258 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 SOSTQ9BQB4 213 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 RTL8AQ9BWD3 113 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 NOP16Q9Y3C1 178 aaKnown RBP7.59□□□□□ -1.19
USP53-207ENST00000510852 TRAV8-4A0A0B4J246 113 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 SNURFLB1AK76 121 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 DPM2O94777 84 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 HIST1H1DP16402 221 aaKnown RBP7.59□□□□□ -1.19
USP53-207ENST00000510852 NFYBP25208 207 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 DIAPH2-AS1Q14236 149 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 SP6Q3SY56 376 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 PIK3CD-AS1Q5SR53 167 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 SP5Q6BEB4 398 aaPredicted RBP7.59□□□□□ -1.19
USP53-207ENST00000510852 LCN12Q6JVE5 192 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 LCN15Q6UWW0 184 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 WDR86Q86TI4 376 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 ABRACLQ9P1F3 81 aa7.59□□□□□ -1.19
USP53-207ENST00000510852 HELZ2Q9BYK8 2649 aaKnown RBP7.58□□□□□ -1.2
USP53-207ENST00000510852 ICE1Q9Y2F5 2266 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 IGHV3-64DA0A0J9YX35 117 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 PPP1CCP36873 323 aaKnown RBP7.58□□□□□ -1.2
USP53-207ENST00000510852 FAM3DQ96BQ1 224 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 OR5V1Q9UGF6 321 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
USP53-207ENST00000510852 DCHS2Q6V1P9 2916 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 IGHV1-46P01743 117 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 MED14OSP0DP75 135 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 COX6B1P14854 86 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 TMEM187Q14656 261 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 GVQW1Q8N7I0 195 aa7.58□□□□□ -1.2
USP53-207ENST00000510852 MRPS16Q9Y3D3 137 aaKnown RBP7.58□□□□□ -1.2
USP53-207ENST00000510852 LRBAP50851 2863 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 PKDREJQ9NTG1 2253 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 TEX48A0A1B0GUV7 120 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 LINC01619G3V211 115 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 AGPAT2O15120 278 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 ANGPTL7O43827 346 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 SIX6O95475 246 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 ADMP35318 185 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 RIGQ13278 110 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 GFI1BQ5VTD9 330 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 SLC25A26Q70HW3 274 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 PHLDA1Q8WV24 401 aaPredicted RBP7.57□□□□□ -1.2
USP53-207ENST00000510852 C1orf147Q96MC9 270 aaPredicted RBP7.57□□□□□ -1.2
USP53-207ENST00000510852 DYNLRB1Q9NP97 96 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 IGKV1-12A0A0C4DH73 117 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 TMEM272A0A1B0GTI8 110 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 KNCNA6PVL3 124 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 IGKV1D-12P01611 117 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 H2BFSP57053 126 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 TAS2R46P59540 309 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 SPRNQ5BIV9 151 aa7.57□□□□□ -1.2
USP53-207ENST00000510852 USP9YO00507 2555 aaPredicted RBP7.56□□□□□ -1.2
USP53-207ENST00000510852 H3BP45 60 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 GABARAPH6UMI1 98 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 PAX4O43316 350 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 BCL2P10415 239 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 QRFPP83859 136 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 LOXL1Q08397 574 aaPredicted RBP7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 BEAN1Q3B7T3 259 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
USP53-207ENST00000510852 Q6AWC8 147 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 Q6ZRU5 148 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 OR4A5Q8NH83 315 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 ITLN1Q8WWA0 313 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 AQP3Q92482 292 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 IGF2BP2-AS1Q96M15 143 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 MRPL32Q9BYC8 188 aaKnown RBP7.56□□□□□ -1.2
USP53-207ENST00000510852 WASHC3Q9Y3C0 194 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 PYGO1Q9Y3Y4 419 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 TRGV10A0A0A0MS01 117 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 G3V3Q6 166 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 TMEM183BQ1AE95 376 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 TMEM183AQ8IXX5 376 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 MKXQ8IYA7 352 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 LY6G5BQ8NDX9 201 aa7.56□□□□□ -1.2
USP53-207ENST00000510852 TRAV8-2A0A0B4J237 113 aa7.55□□□□□ -1.2
USP53-207ENST00000510852 TMEM14DPA8MWL7 114 aa7.55□□□□□ -1.2
USP53-207ENST00000510852 CYB5AP00167 134 aa7.55□□□□□ -1.2
USP53-207ENST00000510852 CA2P00918 260 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms