RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RCHY1Q96PM5 261 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 CITED1Q99966 193 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 SLC25A2Q9BXI2 301 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 MRPL32Q9BYC8 188 aaKnown RBP3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 AICDAQ9GZX7 198 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 IFI27L2Q9H2X8 130 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 LIME1Q9H400 295 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 ALKBH4Q9NXW9 302 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 MTCH1Q9NZJ7 389 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 SS18L2Q9UHA2 77 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 WDR83OSQ9Y284 106 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 LHFPL6Q9Y693 200 aa3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 UTP20O75691 2785 aaKnown RBP3.65□□□□□ -1.83
PDLIM5-211ENST00000508531 CPAMD8Q8IZJ3 1885 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 ICE1Q9Y2F5 2266 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 TRBV20-1A0A075B6N2 111 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 IGKV1D-8A0A087WSZ0 117 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 TMED7-TICAM2A0A0A6YYA0 188 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 EDDM13A0A1B0GTR0 161 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 A0A1W2PRE2 83 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 FRG2CA6NGY1 282 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 A8MWL6 223 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 C4orf51C9J302 202 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 E9PLD3 99 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 F2Z2F3 143 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 LINC01619G3V211 115 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 H3BP45 60 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 TNFSF11O14788 317 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 PGLYRP1O75594 196 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 SNCGO76070 127 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 IGKV1D-33P01593 117 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 IGKV1-33P01594 117 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 PRSS1P07477 247 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 MGST1P10620 155 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 IFITM1P13164 125 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 GABRG2P18507 467 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 EDN2P20800 178 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 NPPCP23582 126 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 GCHFRP30047 84 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 OTX2P32243 289 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 ATP5G3P48201 142 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 MFAP2P55001 183 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 RBM11P57052 281 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 RPL30P62888 115 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 GAGE2BQ13066 116 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 HES1Q14469 280 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 GAGE2EQ4V326 116 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 CENPWQ5EE01 88 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 GFRALQ6UXV0 394 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF818PQ6ZRF7 136 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 Q6ZUT4 128 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 C2orf91Q6ZV80 131 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 H2BFWTQ7Z2G1 175 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 VN1R4Q7Z5H5 301 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 CA13Q8N1Q1 262 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 C2orf73Q8N5S3 287 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 OR10J6PQ8NGY7 276 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 WFDC5Q8TCV5 224 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 NRGNQ92686 78 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 PIGTQ969N2 578 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 DNAJA3Q96EY1 480 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 DNAJC30Q96LL9 226 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 PLEKHA3Q9HB20 300 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 SH2D2AQ9NP31 389 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 CLCF1Q9UBD9 225 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 GAGE2DQ9UEU5 116 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 C19orf25Q9UFG5 118 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 TBC1D29Q9UFV1 150 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF835Q9Y2P0 537 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 TRPM6Q9BX84 2022 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 KNL1Q8NG31 2342 aa3.64□□□□□ -1.83
PDLIM5-211ENST00000508531 OBSL1O75147 1896 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 TMEM131Q92545 1883 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 TRBV20OR9-2A0A075B6H5 130 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 IGKV3D-15A0A087WSY6 115 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 IGKV1-9A0A0C4DH69 117 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 A0A1B0GWB2 263 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 A0A1B0GX51 115 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 LILRA5A6NI73 299 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 B9A039 149 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 K7EQS6 105 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 IGKV1D-16P01601 117 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 ATP5G1P05496 136 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 ARL14EPLP0DKL9 152 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 IAPPP10997 89 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 SRYQ05066 204 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 ATP5G2Q06055 141 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 MEF2CQ06413 473 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 FAM53BQ14153 422 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 PMVKQ15126 192 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 Q6AWC8 147 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 RHBDD2Q6NTF9 364 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 MOGAT3Q86VF5 341 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 LRRC75A-AS1Q8N1F1 130 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 RPRMLQ8N4K4 120 aa3.63□□□□□ -1.83
PDLIM5-211ENST00000508531 ZNF611Q8N823 705 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms