RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 FAM90A2PQ658T7 463 aa15.14■□□□□ 0.01
USP53-203ENST00000507597 PATE2Q6UY27 113 aa15.14■□□□□ 0.01
USP53-203ENST00000507597 TMEM61Q8N0U2 210 aa15.14■□□□□ 0.01
USP53-203ENST00000507597 STXBP6Q8NFX7 210 aa15.14■□□□□ 0.01
USP53-203ENST00000507597 TMEM37Q8WXS4 190 aa15.14■□□□□ 0.01
USP53-203ENST00000507597 ZNF785A8K8V0 405 aa15.13■□□□□ 0.01
USP53-203ENST00000507597 TAS2R45P59539 299 aa15.13■□□□□ 0.01
USP53-203ENST00000507597 KPRPQ5T749 579 aaPredicted RBP15.13■□□□□ 0.01
USP53-203ENST00000507597 CYTL1Q9NRR1 136 aa15.13■□□□□ 0.01
USP53-203ENST00000507597 ATF4P18848 351 aaPredicted RBP15.12■□□□□ 0.01
USP53-203ENST00000507597 BEAN1Q3B7T3 259 aa15.12■□□□□ 0.01
USP53-203ENST00000507597 SLC51BQ86UW2 128 aa15.12■□□□□ 0.01
USP53-203ENST00000507597 BAP18Q8IXM2 172 aa15.12■□□□□ 0.01
USP53-203ENST00000507597 UHRF2Q96PU4 802 aa15.12■□□□□ 0.01
USP53-203ENST00000507597 NRN1Q9NPD7 142 aa15.12■□□□□ 0.01
USP53-203ENST00000507597 SEC11BP0C7V7 166 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 CD300CQ08708 224 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 AKR1C8PQ5T2L2 129 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 OR10G4Q8NGN3 311 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 OR10G9Q8NGN4 311 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 OR10G7Q8NGN6 311 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 SCRT1Q9BWW7 348 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 SLC25A32Q9H2D1 315 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 FUT9Q9Y231 359 aa15.11■□□□□ 0.01
USP53-203ENST00000507597 IGKV3-7A0A075B6H7 116 aa15.1■□□□□ 0.01
USP53-203ENST00000507597 ID1P41134 155 aa15.1■□□□□ 0.01
USP53-203ENST00000507597 MS4A6AQ9H2W1 248 aa15.1■□□□□ 0.01
USP53-203ENST00000507597 SEPSECSQ9HD40 501 aaKnown RBP15.1■□□□□ 0.01
USP53-203ENST00000507597 IZUMO1RA6ND01 250 aa15.09■□□□□ 0.01
USP53-203ENST00000507597 SPP1P10451 314 aa15.09■□□□□ 0.01
USP53-203ENST00000507597 C9orf62Q8N4C0 152 aa15.09■□□□□ 0.01
USP53-203ENST00000507597 STOML3Q8TAV4 291 aa15.09■□□□□ 0.01
USP53-203ENST00000507597 LRRC20Q8TCA0 184 aa15.09■□□□□ 0.01
USP53-203ENST00000507597 NOTCH3Q9UM47 2321 aa15.08■□□□□ 0
USP53-203ENST00000507597 UMAD1C9J7I0 102 aa15.08■□□□□ 0
USP53-203ENST00000507597 SNRPD3P62318 126 aaKnown RBP15.08■□□□□ 0
USP53-203ENST00000507597 GUK1Q16774 197 aa15.08■□□□□ 0
USP53-203ENST00000507597 KHDC3LQ587J8 217 aa15.08■□□□□ 0
USP53-203ENST00000507597 TMEM41BQ5BJD5 291 aa15.08■□□□□ 0
USP53-203ENST00000507597 LEMD1Q68G75 181 aa15.08■□□□□ 0
USP53-203ENST00000507597 WFDC3Q8IUB2 231 aa15.08■□□□□ 0
USP53-203ENST00000507597 GBGT1Q8N5D6 347 aa15.08■□□□□ 0
USP53-203ENST00000507597 FAM110AQ9BQ89 295 aa15.08■□□□□ 0
USP53-203ENST00000507597 ACTR3CQ9C0K3 210 aaPredicted RBP15.08■□□□□ 0
USP53-203ENST00000507597 TFPI2P48307 235 aa15.07■□□□□ 0
USP53-203ENST00000507597 GCSAMLQ5JQS6 135 aa15.07■□□□□ 0
USP53-203ENST00000507597 SH3BGRL3Q9H299 93 aa15.07■□□□□ 0
USP53-203ENST00000507597 CLEC5AQ9NY25 188 aa15.07■□□□□ 0
USP53-203ENST00000507597 TMEM14CQ9P0S9 112 aa15.07■□□□□ 0
USP53-203ENST00000507597 SELENOKQ9Y6D0 94 aa15.07■□□□□ 0
USP53-203ENST00000507597 CDC34P49427 236 aaPredicted RBP15.06■□□□□ 0
USP53-203ENST00000507597 CD81P60033 236 aa15.06■□□□□ 0
USP53-203ENST00000507597 KRTAP10-11P60412 298 aa15.06■□□□□ 0
USP53-203ENST00000507597 FAM122CQ6P4D5 195 aa15.06■□□□□ 0
USP53-203ENST00000507597 PKD1L1Q8TDX9 2849 aa15.06■□□□□ 0
USP53-203ENST00000507597 A0A087X0K7 114 aa15.05■□□□□ -0
USP53-203ENST00000507597 OR11H12B2RN74 326 aa15.05■□□□□ -0
USP53-203ENST00000507597 K7EQG2 157 aa15.05■□□□□ -0
USP53-203ENST00000507597 LCN15Q6UWW0 184 aa15.05■□□□□ -0
USP53-203ENST00000507597 PQLC2Q6ZP29 291 aa15.05■□□□□ -0
USP53-203ENST00000507597 C16orf92Q96LL3 132 aa15.05■□□□□ -0
USP53-203ENST00000507597 OR51M1Q9H341 326 aa15.05■□□□□ -0
USP53-203ENST00000507597 ISLRO14498 428 aa15.04■□□□□ -0
USP53-203ENST00000507597 OR7C2O60412 319 aa15.04■□□□□ -0
USP53-203ENST00000507597 HIST1H1EP10412 219 aaKnown RBP15.04■□□□□ -0
USP53-203ENST00000507597 RAB5CP51148 216 aa15.04■□□□□ -0
USP53-203ENST00000507597 RAB2AP61019 212 aa15.04■□□□□ -0
USP53-203ENST00000507597 DPPA3Q6W0C5 159 aa15.04■□□□□ -0
USP53-203ENST00000507597 MIR17HGQ75NE6 70 aa15.04■□□□□ -0
USP53-203ENST00000507597 DCANP1Q8TF63 244 aa15.04■□□□□ -0
USP53-203ENST00000507597 PRR25Q96S07 402 aa15.04■□□□□ -0
USP53-203ENST00000507597 SLC50A1Q9BRV3 221 aa15.04■□□□□ -0
USP53-203ENST00000507597 PAXXQ9BUH6 204 aa15.04■□□□□ -0
USP53-203ENST00000507597 HRH4Q9H3N8 390 aa15.04■□□□□ -0
USP53-203ENST00000507597 MGAM2Q2M2H8 2515 aa15.04■□□□□ -0
USP53-203ENST00000507597 TRAV5A0A0B4J249 113 aa15.03■□□□□ -0
USP53-203ENST00000507597 PSMB3P49720 205 aa15.03■□□□□ -0
USP53-203ENST00000507597 RPRMQ9NS64 109 aa15.03■□□□□ -0
USP53-203ENST00000507597 CTXND1A0A1B0GTU2 59 aa15.02■□□□□ -0
USP53-203ENST00000507597 ZNF253O75346 499 aa15.02■□□□□ -0
USP53-203ENST00000507597 PDE6HQ13956 83 aa15.02■□□□□ -0
USP53-203ENST00000507597 MORN5Q5VZ52 161 aa15.02■□□□□ -0
USP53-203ENST00000507597 RPP25LQ8N5L8 163 aaKnown RBP15.02■□□□□ -0
USP53-203ENST00000507597 PHYHIPLQ96FC7 376 aa15.02■□□□□ -0
USP53-203ENST00000507597 SLC25A2Q9BXI2 301 aa15.02■□□□□ -0
USP53-203ENST00000507597 AURKAIP1Q9NWT8 199 aaPredicted RBP15.02■□□□□ -0
USP53-203ENST00000507597 RFNGQ9Y644 331 aa15.02■□□□□ -0
USP53-203ENST00000507597 SMAD5-AS1Q9Y6J3 95 aa15.02■□□□□ -0
USP53-203ENST00000507597 NKX2-5P52952 324 aaPredicted RBP15.01□□□□□ -0.01
USP53-203ENST00000507597 PSG9Q00887 426 aa15.01□□□□□ -0.01
USP53-203ENST00000507597 RNF141Q8WVD5 230 aa15.01□□□□□ -0.01
USP53-203ENST00000507597 TMED6Q8WW62 240 aa15.01□□□□□ -0.01
USP53-203ENST00000507597 RAB24Q969Q5 203 aa15.01□□□□□ -0.01
USP53-203ENST00000507597 TUBA4BQ9H853 241 aa15.01□□□□□ -0.01
USP53-203ENST00000507597 TEX46H3BTG2 121 aa15□□□□□ -0.01
USP53-203ENST00000507597 MRPS12O15235 138 aaKnown RBP15□□□□□ -0.01
USP53-203ENST00000507597 CXorf1O96002 111 aa15□□□□□ -0.01
USP53-203ENST00000507597 CD7P09564 240 aa15□□□□□ -0.01
USP53-203ENST00000507597 NBEAP1P0C6P0 100 aa15□□□□□ -0.01
USP53-203ENST00000507597 SPATA31B1PQ5VZV4 182 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms