RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 H3BQ15 152 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 J3KRW8 73 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 GGCTO75223 188 aaKnown RBP7.93□□□□□ -1.14
TPM3-217ENST00000504663 SRP19P09132 144 aaKnown RBP7.93□□□□□ -1.14
TPM3-217ENST00000504663 OR10J4P0C629 311 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 NPPCP23582 126 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 CRYBB3P26998 211 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 ATP5G3P48201 142 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 PSMB3P49720 205 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 RELQ04864 619 aaPredicted RBP7.93□□□□□ -1.14
TPM3-217ENST00000504663 HAGHQ16775 308 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 PQLC2Q6ZP29 291 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 CCDC28AQ8IWP9 274 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.93□□□□□ -1.14
TPM3-217ENST00000504663 C4orf3Q8WVX3 66 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 SMAD5-AS1Q9Y6J3 95 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 TENM1Q9UKZ4 2725 aa7.93□□□□□ -1.14
TPM3-217ENST00000504663 CMYA5Q8N3K9 4069 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 NIPBLQ6KC79 2804 aaeCLIP7.92□□□□□ -1.14
TPM3-217ENST00000504663 TMEM213A2RRL7 107 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 GGTLC3B5MD39 225 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 BUB3O43684 328 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 PAGE4O60829 102 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 NDUFS6O75380 124 aaKnown RBP7.92□□□□□ -1.14
TPM3-217ENST00000504663 SCGB2A1O75556 95 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 NDUFB4O95168 129 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 HSPB1P04792 205 aaKnown RBP7.92□□□□□ -1.14
TPM3-217ENST00000504663 CRYBA1P05813 215 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 TAS2R45P59539 299 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 FHL3Q13643 280 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 DEFB136Q30KP8 78 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 GPHB5Q86YW7 130 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 OR4F5Q8NH21 305 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 WFDC12Q8WWY7 111 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 CITED2Q99967 270 aaPredicted RBP7.92□□□□□ -1.14
TPM3-217ENST00000504663 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 OR51M1Q9H341 326 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 MANBALQ9NQG1 85 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 ZNF586Q9NXT0 402 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 RABAC1Q9UI14 185 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 ARL2-SNX15V9GYD0 113 aa7.92□□□□□ -1.14
TPM3-217ENST00000504663 TMEM218A2RU14 115 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 A8MWP6 167 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 SLC17A3O00476 420 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 ZNF207O43670 478 aaKnown RBP7.91□□□□□ -1.14
TPM3-217ENST00000504663 OR7C2O60412 319 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 ZP3P21754 424 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 HOXD3P31249 432 aaPredicted RBP7.91□□□□□ -1.14
TPM3-217ENST00000504663 UBE2L3P68036 154 aaKnown RBP7.91□□□□□ -1.14
TPM3-217ENST00000504663 FAM90A2PQ658T7 463 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 CFAP161Q6P656 301 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 ADAMTSL5Q6ZMM2 481 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 RXFP4Q8TDU9 374 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 GLMPQ8WWB7 406 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 MDFIQ99750 246 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 TMEM167BQ9NRX6 74 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 RNF114Q9Y508 228 aa7.91□□□□□ -1.14
TPM3-217ENST00000504663 H3BTX0 84 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 SNRPCP09234 159 aaKnown RBP7.9□□□□□ -1.14
TPM3-217ENST00000504663 PPT1P50897 306 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 SLURP1P55000 103 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 UBE2G2P60604 165 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 MEF2BQ02080 365 aaPredicted RBP7.9□□□□□ -1.14
TPM3-217ENST00000504663 KLF5Q13887 457 aaPredicted RBP7.9□□□□□ -1.14
TPM3-217ENST00000504663 C16orf54Q6UWD8 224 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 C8orf86Q6ZUL3 223 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 C11orf44Q8N8P7 122 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 RAX2Q96IS3 184 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 DUX3Q96PT4 197 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 SMDT1Q9H4I9 107 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 VAX2Q9UIW0 290 aa7.9□□□□□ -1.14
TPM3-217ENST00000504663 JMJD1CQ15652 2540 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 TRBV19A0A075B6N1 114 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 IGHV3OR16-13A0A075B7E8 117 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 A0A087X0K7 114 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 IGHV3-49A0A0A0MS15 119 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 IGHV3-74A0A0B4J1X5 117 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 IGHV3-66A0A0C4DH42 116 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 IGHV7-4-1A0A0J9YVY3 117 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 A0A1W2PRE2 83 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 K7EMT4 169 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 LGALS9O00182 355 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 IFNA1P01562 189 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 SFTA3P0C7M3 94 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 HIST1H1EP10412 219 aaKnown RBP7.89□□□□□ -1.15
TPM3-217ENST00000504663 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 SIGLEC15Q6ZMC9 328 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 PRIMA1Q86XR5 153 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 IQCF2Q8IXL9 164 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 CYB561D1Q8N8Q1 229 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 KLHL30-AS1Q8NEE0 82 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 STXBP6Q8NFX7 210 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 C11orf52Q96A22 123 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 C20orf24Q9BUV8 137 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 ELOVL1Q9BW60 279 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 EIF5A2Q9GZV4 153 aaKnown RBP7.89□□□□□ -1.15
TPM3-217ENST00000504663 CARHSP1Q9Y2V2 147 aaKnown RBP7.89□□□□□ -1.15
TPM3-217ENST00000504663 ANK2Q01484 3957 aa7.89□□□□□ -1.15
TPM3-217ENST00000504663 SCO2A0A1W2PP80 73 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms