RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 LYZL6O75951 148 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 KDELR1P24390 212 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 S100A4P26447 101 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 FXYD7P58549 80 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 TMEM258P61165 79 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 RPL30P62888 115 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 COL5A1-AS1Q5SY13 56 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 BCL2L15Q5TBC7 163 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 RPL22L1Q6P5R6 122 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 OR51A4Q8NGJ6 313 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 SMCR5Q8TEV8 140 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 BORCS8Q96FH0 119 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 TMEM191AQ9H0A3 160 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 RNF122Q9H9V4 155 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 FUT9Q9Y231 359 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 FAM215AQ9Y5M1 114 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 V9GYS6 101 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 ADGRB3O60242 1522 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 CCDC88AQ3V6T2 1871 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 CEP162Q5TB80 1403 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 NSD3Q9BZ95 1437 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 MPDZO75970 2070 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 PTPRSQ13332 1948 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 DENND4CQ5VZ89 1909 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 GGT3PA6NGU5 568 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 ZNF860A6NHJ4 632 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 SNAPC5O75971 98 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 CST7O76096 145 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H1BP16401 226 aaKnown RBP2□□□□□ -2.09
TRAPPC13-205ENST00000504243 CD24P25063 80 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 NFYBP25208 207 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 SDC2P34741 201 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 RAB5CP51148 216 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 LSM3P62310 102 aaKnown RBP2□□□□□ -2.09
TRAPPC13-205ENST00000504243 CDK6Q00534 326 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 VMA21Q3ZAQ7 101 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 GLYATL3Q5SZD4 288 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 C1orf140Q5VVS0 124 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 SCIMPQ6UWF3 145 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 TRAPPC6BQ86SZ2 158 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 PRR15Q8IV56 129 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 EXOC3-AS1Q8N2X6 119 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 ZNF436-AS1Q8NC38 126 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-205ENST00000504243 COPS9Q8WXC6 57 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 PP6455Q8WZ26 134 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 H1FXQ92522 213 aaKnown RBP2□□□□□ -2.09
TRAPPC13-205ENST00000504243 TEX37Q96LM6 180 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 GINS4Q9BRT9 223 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 SCN3BQ9NY72 215 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 IL36BQ9NZH7 164 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 PCTPQ9UKL6 214 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 TNFSF18Q9UNG2 199 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 AMMECR1Q9Y4X0 333 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-205ENST00000504243 ERICH3Q5RHP9 1530 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 SLX4Q8IY92 1834 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 ARHGAP32A7KAX9 2087 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 COL4A2P08572 1712 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 RTEL1-TNFRSF6BF6WH68 1400 aa2□□□□□ -2.09
TRAPPC13-205ENST00000504243 TMEM2Q9UHN6 1383 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 IGLV3-9A0A075B6K5 115 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 NPFFO15130 113 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 LEPROTO15243 131 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 OR2T1O43869 369 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 TRGC2P03986 189 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H2BOP23527 126 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H2BBP33778 126 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 SRP14P37108 136 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 CSN1S1P47710 185 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 TMBIM6P55061 237 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H2BDP58876 126 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 YPEL3P61236 119 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H2BCP62807 126 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 CCL20P78556 96 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST2H2BEQ16778 126 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 RRN3P1Q2M238 152 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 AADACL3Q5VUY0 350 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HRCT1Q6UXD1 115 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 ZNF705AQ6ZN79 300 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 OR5H6Q8NGV6 325 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 OR2T10Q8NGZ9 312 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H2BHQ93079 126 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 YPEL2Q96QA6 119 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H2BNQ99877 126 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H2BMQ99879 126 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 METTL1Q9UBP6 276 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 TIMM9Q9Y5J7 89 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 CAMSAP2Q08AD1 1489 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 CCDC18Q5T9S5 1454 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 TECPR2O15040 1411 aa1.99□□□□□ -2.09
TRAPPC13-205ENST00000504243 FBN1P35555 2871 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-205ENST00000504243 TMSB15BA0A087X1C1 80 aa1.98□□□□□ -2.09
TRAPPC13-205ENST00000504243 TRBV7-6A0A0J9YX20 115 aa1.98□□□□□ -2.09
TRAPPC13-205ENST00000504243 A0A1B0GW64 132 aa1.98□□□□□ -2.09
TRAPPC13-205ENST00000504243 TMEM212A6NML5 194 aa1.98□□□□□ -2.09
TRAPPC13-205ENST00000504243 BUB1B-PAK6H3BSN5 160 aa1.98□□□□□ -2.09
TRAPPC13-205ENST00000504243 GABARAPH6UMI1 98 aa1.98□□□□□ -2.09
TRAPPC13-205ENST00000504243 CDC42EP2O14613 210 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms