RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 OVOL3O00110 214 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 DEFB130BP0DP73 79 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 DEFB130AP0DP74 79 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 DMRTC2Q8IXT2 367 aaPredicted RBP5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 LYPD1Q8N2G4 141 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 CYTL1Q9NRR1 136 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 ANK1P16157 1881 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 CKAP5Q14008 2032 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 A0A1B0GW64 132 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 UBE2E1P51965 193 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 TMEM14EPQ6UXP3 125 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 GLRX5Q86SX6 157 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 NUP35Q8NFH5 326 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 ATP6V0E1O15342 81 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 RNASE2P10153 161 aaKnown RBP5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 FAM110DQ8TAY7 271 aaPredicted RBP5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 IGHV1-69DA0A0B4J2H0 117 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 IGHV1-69P01742 117 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 PRTN3P24158 256 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 DEFB131AP59861 70 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 CFHR3Q02985 330 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 MS4A6AQ9H2W1 248 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BKO60814 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BJP06899 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BOP23527 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BBP33778 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BDP58876 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BCP62807 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 QRFPP83859 136 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST2H2BEQ16778 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 FAM90A2PQ658T7 463 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BHQ93079 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BNQ99877 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BMQ99879 126 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 LAMTOR3Q9UHA4 124 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 IGHV2-70DA0A0C4DH43 119 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 LEPROTO15243 131 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 TNFSF13O75888 250 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 CXCL1P09341 107 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 C6orf226Q5I0X4 101 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 SAMD5Q5TGI4 173 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 UNC13CQ8NB66 2214 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 C1orf159Q96HA4 380 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 SHANK2-AS3Q9BTD1 123 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 TMEM242Q9NWH2 141 aa5.82□□□□□ -1.48
SYNPO2-205ENST00000504178 TICRRQ7Z2Z1 1910 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 A8MWV9 139 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 Q86TA4 180 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 ZNRD1Q9P1U0 126 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 RFNGQ9Y644 331 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 MGAMO43451 1857 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 GBF1Q92538 1859 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 C15orf62A8K5M9 175 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 SMKR1H3BMG3 65 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 GATA4P43694 442 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 ZNF479Q96JC4 524 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 TRAV13-1A0A0B4J241 112 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 TRAV1-1A0A0B4J248 108 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 DAD1P61803 113 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 C8orf49Q96NF6 230 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 SPAG8Q99932 426 aaPredicted RBP5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 SPOCK3Q9BQ16 436 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 INS-IGF2F8WCM5 200 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 CEACAM8P31997 349 aaPredicted RBP5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 SEC11AP67812 179 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 TMEM158Q8WZ71 300 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 DKK1O94907 266 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 C1orf122Q6ZSJ8 110 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 Q71RC1 249 aaPredicted RBP5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 TRPT1Q86TN4 253 aaKnown RBP5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 TMEM75Q8N9X5 138 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 Q8TCH9 128 aa5.81□□□□□ -1.48
SYNPO2-205ENST00000504178 J3QKU1 62 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 RPRMLQ8N4K4 120 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 LOC105371267A0A1B0GV96 52 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 AMBPP02760 352 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 IGKV1-16P04430 117 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 Q6ZS49 121 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 LINC01551Q86U37 167 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 LY96Q9Y6Y9 160 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 FNDC10F2Z333 226 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 F5H768 121 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 KLK9Q9UKQ9 250 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 FNDC1Q4ZHG4 1894 aaPredicted RBP5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 E9PQ18 207 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 LGALS1P09382 135 aaKnown RBP5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 OVOL2Q9BRP0 275 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 TIMM21Q9BVV7 248 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 UBE2CO00762 179 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 ITGB1BP1O14713 200 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 MLANAQ16655 118 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 ZNF833PQ6ZTB9 187 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 MEGF9Q9H1U4 602 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 XCL2Q9UBD3 114 aa5.8□□□□□ -1.48
SYNPO2-205ENST00000504178 A0A1W2PPI3 338 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 TRAV8-1A0A0A6YYK1 113 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 J3QLI3 93 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms