RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 MEOX1P50221 254 aa14.28□□□□□ -0.12
POLR2J3-209ENST00000504157 PEAR1Q5VY43 1037 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-209ENST00000504157 THAP8Q8NA92 274 aa14.28□□□□□ -0.12
POLR2J3-209ENST00000504157 ARRDC1-AS1Q9H2J1 176 aa14.28□□□□□ -0.12
POLR2J3-209ENST00000504157 PRO0461Q9UI25 63 aa14.28□□□□□ -0.12
POLR2J3-209ENST00000504157 LINC00312Q9Y6C7 94 aa14.28□□□□□ -0.12
POLR2J3-209ENST00000504157 LYZL6O75951 148 aa14.27□□□□□ -0.12
POLR2J3-209ENST00000504157 RIGQ13278 110 aa14.27□□□□□ -0.12
POLR2J3-209ENST00000504157 TMEM30BQ3MIR4 351 aa14.27□□□□□ -0.12
POLR2J3-209ENST00000504157 DOCK10Q96BY6 2186 aa14.27□□□□□ -0.12
POLR2J3-209ENST00000504157 A0A1B0GW15 77 aa14.27□□□□□ -0.13
POLR2J3-209ENST00000504157 H3BMG7 143 aa14.27□□□□□ -0.13
POLR2J3-209ENST00000504157 COL8A1P27658 744 aa14.27□□□□□ -0.13
POLR2J3-209ENST00000504157 LEAP2Q969E1 77 aa14.27□□□□□ -0.13
POLR2J3-209ENST00000504157 CHAC1Q9BUX1 264 aa14.27□□□□□ -0.13
POLR2J3-209ENST00000504157 NDUFA4L2Q9NRX3 87 aa14.27□□□□□ -0.13
POLR2J3-209ENST00000504157 INSL3P51460 131 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 TCF15Q12870 199 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 GAGE13Q4V321 117 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 Q6ZT83 130 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 PRSS33Q8NF86 280 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 CYSLTR1Q9Y271 337 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 SLC25A17O43808 307 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 ERHP84090 104 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 IFI27L1Q96BM0 104 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 LINC00574Q9H8X3 128 aa14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 NHP2Q9NX24 153 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-209ENST00000504157 CEND1Q8N111 149 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 C1orf162Q8NEQ5 155 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 ZNF479Q96JC4 524 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 CDIP1Q9H305 208 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 SPRR3Q9UBC9 169 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 ERG28Q9UKR5 140 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 IGKV1D-37A0A075B6S9 117 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 VSTM5A8MXK1 200 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 HBDP02042 147 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 ARMS2P0C7Q2 107 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 SAA1P0DJI8 122 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 SRSF1Q07955 248 aaKnown RBP eCLIP14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 ZNRF1Q8ND25 227 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 MDS2Q8NDY4 140 aa14.25□□□□□ -0.13
POLR2J3-209ENST00000504157 DOCK7Q96N67 2140 aa14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 IGKV1-16P04430 117 aa14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 TCRAP04437 139 aa14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 SPINK8P0C7L1 97 aa14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 SSBP2P81877 361 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 PAX8Q06710 450 aa14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 KLRD1Q13241 179 aa14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 LCNL1Q6ZST4 164 aa14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 C20orf78Q9BR46 151 aa14.24□□□□□ -0.13
POLR2J3-209ENST00000504157 LINC00305Q7Z4B0 112 aa14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 OSR1Q8TAX0 266 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 SPRY4Q9C004 299 aa14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 FZR1Q9UM11 496 aa14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 PSG8Q9UQ74 426 aa14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 U3KQK5 164 aa14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 hADV38S2A0JD32 116 aa14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 SHISA9B4DS77 424 aa14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 TNCP24821 2201 aa14.23□□□□□ -0.13
POLR2J3-209ENST00000504157 TRGV5A0A0B4J1U4 118 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 IGLV1-44P01699 117 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 CECR9P0C854 216 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 GATA3P23771 443 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 SRSF6Q13247 344 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 RITA1Q96K30 269 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 DKK2Q9UBU2 259 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 IGHV3OR15-7A0A075B7D8 119 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 IGKV2D-26A0A0A0MRZ7 120 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 LHBP01229 141 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 Q86TA4 180 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 ZCCHC24Q8N2G6 241 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 RNF183Q96D59 192 aa14.22□□□□□ -0.13
POLR2J3-209ENST00000504157 NDUFS7O75251 213 aa14.21□□□□□ -0.13
POLR2J3-209ENST00000504157 ZNF493Q6ZR52 646 aa14.21□□□□□ -0.13
POLR2J3-209ENST00000504157 ATP6V0E2Q8NHE4 81 aa14.21□□□□□ -0.13
POLR2J3-209ENST00000504157 TMEM190Q8WZ59 177 aa14.21□□□□□ -0.13
POLR2J3-209ENST00000504157 NPIPB3Q92617 1050 aa14.21□□□□□ -0.13
POLR2J3-209ENST00000504157 TRBV25-1A0A075B6N4 114 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 LOC389332A0A1B0GUA5 103 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 C16orf97H3BN30 126 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 PLAUP00749 431 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 FOXI1Q12951 378 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 PLA2G2CQ5R387 149 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 Q6ZS92 163 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 RBMXL3Q8N7X1 1067 aaKnown RBP14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 SYT8Q8NBV8 401 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 DEFB127Q9H1M4 99 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 ZMAT4Q9H898 229 aa14.21□□□□□ -0.14
POLR2J3-209ENST00000504157 WI2-2373I1.2A0A1W2PRP0 233 aa14.2□□□□□ -0.14
POLR2J3-209ENST00000504157 APOMO95445 188 aa14.2□□□□□ -0.14
POLR2J3-209ENST00000504157 SUB1P53999 127 aaKnown RBP eCLIP14.2□□□□□ -0.14
POLR2J3-209ENST00000504157 CIARTQ8N365 385 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-209ENST00000504157 MUC6Q6W4X9 2439 aa14.2□□□□□ -0.14
POLR2J3-209ENST00000504157 TRBV6-1A0A0K0K1D8 114 aa14.19□□□□□ -0.14
POLR2J3-209ENST00000504157 AMTNQ6UX39 209 aa14.19□□□□□ -0.14
POLR2J3-209ENST00000504157 ZNF833PQ6ZTB9 187 aa14.19□□□□□ -0.14
POLR2J3-209ENST00000504157 SS18L2Q9UHA2 77 aa14.19□□□□□ -0.14
POLR2J3-209ENST00000504157 HHLA3Q9XRX5 114 aa14.19□□□□□ -0.14
POLR2J3-209ENST00000504157 A0A1B0GWB2 263 aa14.19□□□□□ -0.14
POLR2J3-209ENST00000504157 D6R8Y8 96 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms