RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 FNDC4Q9H6D8 234 aaPredicted RBP3.1□□□□□ -1.91
CLTC-209ENST00000498711 ZNF331Q9NQX6 463 aaPredicted RBP3.1□□□□□ -1.91
CLTC-209ENST00000498711 TMEM14CQ9P0S9 112 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 LINC00312Q9Y6C7 94 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 KALRNO60229 2985 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 PTPRZ1P23471 2315 aaPredicted RBP3.1□□□□□ -1.91
CLTC-209ENST00000498711 FREM1Q5H8C1 2179 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 TRAV5A0A0B4J249 113 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 LINC01546A6NGU7 62 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 FCN3O75636 299 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 SAA1P0DJI8 122 aaPredicted RBP3.1□□□□□ -1.91
CLTC-209ENST00000498711 TFPI2P48307 235 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 HNRNPA3P51991 378 aaKnown RBP3.1□□□□□ -1.91
CLTC-209ENST00000498711 UBE2G1P62253 170 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 SSBP2P81877 361 aaPredicted RBP3.1□□□□□ -1.91
CLTC-209ENST00000498711 CDSNQ15517 529 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 KIAA1644Q3SXP7 199 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 PIK3CD-AS1Q5SR53 167 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 Q6ZN92 141 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 Q6ZS92 163 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 LCNL1Q6ZST4 164 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 ZNRF1Q8ND25 227 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 NUP37Q8NFH4 326 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 STXBP6Q8NFX7 210 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 ITLN1Q8WWA0 313 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 PAXXQ9BUH6 204 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 ZNF430Q9H8G1 570 aaPredicted RBP3.1□□□□□ -1.91
CLTC-209ENST00000498711 SCRT2Q9NQ03 307 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 RNF7Q9UBF6 113 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 U3KQK5 164 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 RTTNQ86VV8 2226 aa3.1□□□□□ -1.91
CLTC-209ENST00000498711 E7EUB6 86 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 TAX1BP3O14907 124 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 IGLV2-11P01706 119 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 HIST1H1EP10412 219 aaKnown RBP3.09□□□□□ -1.91
CLTC-209ENST00000498711 FABP6P51161 128 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 FXYD3Q14802 87 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 SAPCD1Q5SSQ6 148 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 LEMD1Q68G75 181 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 LINC00322Q6ZN03 302 aaPredicted RBP3.09□□□□□ -1.91
CLTC-209ENST00000498711 PDPNQ86YL7 162 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 DEFB125Q8N687 156 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 KIR3DL3Q8N743 410 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 ZNF738Q8NE65 137 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 BORCS7Q96B45 105 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 FMC1Q96HJ9 113 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 GPR82Q96P67 336 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 DSCAML1Q8TD84 2053 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 IGHV3OR15-7A0A075B7D8 119 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 SYS1-DBNDD2H3BUS1 97 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 IGHV1-46P01743 117 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 IGKV1-16P04430 117 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 GP9P14770 177 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 GATA2P23769 480 aaPredicted RBP3.09□□□□□ -1.91
CLTC-209ENST00000498711 ERHP84090 104 aaKnown RBP3.09□□□□□ -1.91
CLTC-209ENST00000498711 WT1-ASQ06250 92 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 PAX8Q06710 450 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 GAGE2BQ13066 116 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 SRSF6Q13247 344 aaKnown RBP3.09□□□□□ -1.91
CLTC-209ENST00000498711 EDDM3AQ14507 147 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 GAGE2EQ4V326 116 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 ASPHD1Q5U4P2 390 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 LINC01545Q5VT33 79 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 C10orf113Q5VZT2 155 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 GAGE2AQ6NT46 116 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 MRPL54Q6P161 138 aaKnown RBP3.09□□□□□ -1.91
CLTC-209ENST00000498711 SSX8Q7RTT4 187 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 LYG1Q8N1E2 194 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 FAM19A2Q8N3H0 131 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 OR2T6Q8NHC8 308 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 GTSF1Q8WW33 167 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 PMCHL2Q9BQD1 86 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 FAM103A1Q9BTL3 118 aaKnown RBP3.09□□□□□ -1.91
CLTC-209ENST00000498711 TMEM70Q9BUB7 260 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 RPP21Q9H633 154 aaKnown RBP3.09□□□□□ -1.91
CLTC-209ENST00000498711 ZNF355PQ9NSJ1 428 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 GAGE2DQ9UEU5 116 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 CEP295Q9C0D2 2601 aa3.09□□□□□ -1.91
CLTC-209ENST00000498711 ADGRG4Q8IZF6 3080 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 IGHV3-64DA0A0J9YX35 117 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 A0A1B0GW15 77 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 CORTO00230 105 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 TCF21O43680 179 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 CD5LO43866 347 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 MOSP00540 346 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 CEACAM8P31997 349 aaPredicted RBP3.09□□□□□ -1.92
CLTC-209ENST00000498711 RPL8P62917 257 aaKnown RBP3.09□□□□□ -1.92
CLTC-209ENST00000498711 HBBP68871 147 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 BVES-AS1Q5T3Y7 98 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 ATP1A1-AS1Q5TC04 95 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 LCN12Q6JVE5 192 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 DUX4L9Q6RFH8 374 aaPredicted RBP3.09□□□□□ -1.92
CLTC-209ENST00000498711 ZNF493Q6ZR52 646 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 TCF24Q7RTU0 167 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 VSTM2AQ8TAG5 236 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 PIFOQ8TCI5 191 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 TMEM186Q96B77 213 aa3.09□□□□□ -1.92
CLTC-209ENST00000498711 LINC00479Q96M42 142 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms