RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 OR4B1Q8NGF8 309 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 OR5C1Q8NGR4 320 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 CMTM2Q8TAZ6 248 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 FAM57AQ8TBR7 257 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 EEF1AKMT3Q96AZ1 226 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 REEP6Q96HR9 211 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 ABHD14BQ96IU4 210 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 SMIM7Q9BQ49 75 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 CCL28Q9NRJ3 127 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 PXMP4Q9Y6I8 212 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 TENM4Q6N022 2769 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 FREM3P0C091 2139 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 ZGRF1Q86YA3 2104 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 CEBPZOSA8MTT3 80 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 F6UZH7 168 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 NDUFS8O00217 210 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 CDS2O95674 445 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 IFNA1P01562 189 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF728P0DKX0 622 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 CTRLP40313 264 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 ABCA11PQ4W5N1 156 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 MRPL21Q7Z2W9 205 aaKnown RBP4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 OR5T1Q8NG75 326 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 OR51T1Q8NGJ9 327 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 RTN4IP1Q8WWV3 396 aaPredicted RBP4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 BTF3L4Q96K17 158 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 SPACA5Q96QH8 159 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 VPS25Q9BRG1 176 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 MANBALQ9NQG1 85 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 UQCR10Q9UDW1 63 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 ST3GAL6Q9Y274 331 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 LAMTOR2Q9Y2Q5 125 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 TRAPPC1Q9Y5R8 145 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 LRRK2Q5S007 2527 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 BAHCC1Q9P281 2608 aa4.39□□□□□ -1.71
PAXBP1-209ENST00000497873 TRAV30A0A087WSZ9 112 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 IGHV2OR16-5A0A0B4J2B6 119 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 OMGP23515 440 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 RPL19P84098 196 aaKnown RBP4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF726P1Q15940 193 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 GABRA6Q16445 453 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 SAXO1Q8IYX7 474 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 OR51E1Q8TCB6 317 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 RAB1CQ92928 201 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 APOBEC3DQ96AK3 386 aaPredicted RBP4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 SFXN3Q9BWM7 321 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 ESPL1Q14674 2120 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 DIDO1Q9BTC0 2240 aaKnown RBP4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 A0A1W2PRD5 423 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 PSMB11A5LHX3 300 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 NKX2-6A6NCS4 301 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 IGKV3-15P01624 115 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 IL3RAP26951 378 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 BLVRBP30043 206 aaPredicted RBP4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 OPRM1P35372 400 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 CLEC12BQ2HXU8 276 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 TMEM144Q7Z5S9 345 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 APRG1Q8IVJ8 170 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 OR1N2Q8NGR9 330 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 STARD4Q96DR4 205 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 HSPB9Q9BQS6 159 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 SLC2A9Q9NRM0 540 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 RPRMQ9NS64 109 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 NECAP2Q9NVZ3 263 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 ANXA10Q9UJ72 324 aa4.38□□□□□ -1.71
PAXBP1-209ENST00000497873 SPTBN1Q01082 2364 aaKnown RBP4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 ARHGAP21Q5T5U3 1957 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 SHANK1Q9Y566 2161 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 IGKV1-9A0A0C4DH69 117 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 DUXBA0A1W2PPF3 345 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 TMEM250H0YL14 139 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 SSSCA1O60232 199 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 HYPMO75409 117 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 CST7O76096 145 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 GYPAP02724 150 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 IGLC2P0DOY2 106 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 IGLC3P0DOY3 106 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 FGF8P55075 233 aaPredicted RBP4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 SPATA45Q537H7 98 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 OCIAD2Q56VL3 154 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 CASC10Q5T4H9 136 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 UNQ5815/PRO19632Q6UWF5 114 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 LCN15Q6UWW0 184 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 Q8N976 141 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 WDR31Q8NA23 367 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 OR5D18Q8NGL1 313 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 OR5L1Q8NGL2 311 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 GPR146Q96CH1 333 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 SPIN2AQ99865 258 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 SPIN2BQ9BPZ2 258 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 TP53TG3Q9ULZ0 132 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 MRPS16Q9Y3D3 137 aaKnown RBP4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 FAM215AQ9Y5M1 114 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 SPTAN1Q13813 2472 aaKnown RBP4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 DNAJC13O75165 2243 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 HIVEP3Q5T1R4 2406 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 NCOA6Q14686 2063 aaPredicted RBP4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 LYRM9A8MSI8 78 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 F5H5K5 113 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF737O75373 536 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms