RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 DSCAML1Q8TD84 2053 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 PIEZO1Q92508 2521 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 EP300Q09472 2414 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-224ENST00000497488 LOC102725191A0A1B0GVB3 256 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 SPAARA0A1B0GVQ0 90 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 CD200P41217 278 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 VEGFCP49767 419 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 TAS2R20P59543 309 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 MAXP61244 160 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 PSG9Q00887 426 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 RRN3P1Q2M238 152 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 HRCT1Q6UXD1 115 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 SAXO1Q8IYX7 474 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 RNF175Q8N4F7 328 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 C3orf22Q8N5N4 141 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 TMEM229BQ8NBD8 167 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 GPX7Q96SL4 187 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-224ENST00000497488 VPS25Q9BRG1 176 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 TUBA4BQ9H853 241 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 TRAPPC2LQ9UL33 140 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 FAM186AA6NE01 2351 aa3.88□□□□□ -1.79
BRCA1-224ENST00000497488 CEP192Q8TEP8 1941 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 SDK1Q7Z5N4 2213 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 IGLV4-69A0A075B6H9 119 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 CXorf51AA0A1B0GTR3 108 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 A0A1B0GV90 55 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 ZNF98A6NK75 572 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 BUB1B-PAK6H3BSN5 160 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 H7BYZ3 331 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 MPC1LP0DKB6 136 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 BCL2P10415 239 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 SLC25A16P16260 332 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 ZNF19P17023 458 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 KDELR1P24390 212 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 LINC00612Q8N6U2 182 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 ISOC1Q96CN7 298 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 SLAMF6Q96DU3 332 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 AICDAQ9GZX7 198 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 SPAG17Q6Q759 2223 aa3.87□□□□□ -1.79
BRCA1-224ENST00000497488 RIF1Q5UIP0 2472 aaKnown RBP3.86□□□□□ -1.79
BRCA1-224ENST00000497488 A0A0B4J2C4 111 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 TRDV1A0A1B0GX56 115 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 DHRS12A0PJE2 317 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 MIF4GDA9UHW6 222 aaKnown RBP3.86□□□□□ -1.79
BRCA1-224ENST00000497488 C5orf58C9J3I9 102 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 APOC1P02654 83 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 UBBP0CG47 229 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 CSRP1P21291 193 aaKnown RBP3.86□□□□□ -1.79
BRCA1-224ENST00000497488 S100A11P31949 105 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 EVX1P49640 407 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 RBM11P57052 281 aaKnown RBP3.86□□□□□ -1.79
BRCA1-224ENST00000497488 KRTAP10-11P60412 298 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 DYNLT1P63172 113 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 NDPQ00604 133 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 ZNF816Q0VGE8 651 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-224ENST00000497488 UBALD1Q8TB05 177 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 MGLLQ99685 303 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 VCXQ9H320 206 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 TCEAL2Q9H3H9 227 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-224ENST00000497488 POPDC3Q9HBV1 291 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 HEY1Q9Y5J3 304 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 WDFY3Q8IZQ1 3526 aa3.86□□□□□ -1.79
BRCA1-224ENST00000497488 PTPRZ1P23471 2315 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-224ENST00000497488 TP53BP1Q12888 1972 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-224ENST00000497488 A8MWP6 167 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 OVOL1O14753 267 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 TAX1BP3O14907 124 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 LEPROTO15243 131 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 SOD1P00441 154 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 CRHBPP24387 322 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 INSL3P51460 131 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 KLF3P57682 345 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-224ENST00000497488 RTL8BQ17RB0 113 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 MORN2Q502X0 79 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 LYZL2Q7Z4W2 148 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 CROCCP2Q86T23 111 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 LRRC28Q86X40 367 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-224ENST00000497488 RPRMLQ8N4K4 120 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 OR51T1Q8NGJ9 327 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 CANT1Q8WVQ1 401 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 TEX37Q96LM6 180 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 OR2H1Q9GZK4 316 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 XAGE1AQ9HD64 81 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 CKLFQ9UBR5 152 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 U3KQA8 63 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 FRYQ5TBA9 3013 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 ASPMQ8IZT6 3477 aa3.85□□□□□ -1.79
BRCA1-224ENST00000497488 CEP250Q9BV73 2442 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 DOCK9Q9BZ29 2069 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 SPTY2D1-AS1A0A0U1RR47 76 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 ZNF860A6NHJ4 632 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 C17orf51A8MQB3 221 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 CYB5BO43169 146 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 LY6HO94772 140 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 IGHV1-69P01742 117 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 TRGC2P03986 189 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 HTR1AP08908 422 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 PIRTP0C851 137 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 NFYBP25208 207 aa3.84□□□□□ -1.79
BRCA1-224ENST00000497488 FKBP2P26885 142 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms