RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 TMEM89A2RUT3 159 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 ANKRD30BLA7E2S9 258 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 C9JCJ5 164 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 FAM90A26D6RGX4 464 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 H0Y980 276 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 SLC17A3O00476 420 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 PAGE4O60829 102 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 HSBP1O75506 76 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 LHBP01229 141 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 STAG3L2P0CL84 134 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 CA6P23280 308 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 GPR183P32249 361 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 CFHR2P36980 270 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 PAX9P55771 341 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 MZT1Q08AG7 82 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 SMAGPQ0VAQ4 97 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 KLF5Q13887 457 aaPredicted RBP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 SRSF7Q16629 238 aaKnown RBP eCLIP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 LTC4SQ16873 150 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 CXorf66Q5JRM2 361 aaPredicted RBP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 FOXI2Q6ZQN5 318 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 C9orf139Q6ZV77 190 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 RTN4RL2Q86UN3 420 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 OR10G9Q8NGN4 311 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 OR10G7Q8NGN6 311 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 OR2K2Q8NGT1 345 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 VSTM2AQ8TAG5 236 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 C18orf32Q8TCD1 76 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 TSKUQ8WUA8 353 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 PP6455Q8WZ26 134 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 NPIPB3Q92617 1050 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 LSM10Q969L4 123 aaKnown RBP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 TMEM70Q9BUB7 260 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 TMEM147Q9BVK8 224 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 QTRT1Q9BXR0 403 aaKnown RBP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 GEMIN7Q9H840 131 aaKnown RBP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 MRPL16Q9NX20 251 aaKnown RBP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 PSENENQ9NZ42 101 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 RNF7Q9UBF6 113 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 IGKV1D-8A0A087WSZ0 117 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 TRAV38-1A0A0B4J264 116 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 IGHV3-64DA0A0J9YX35 117 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 M0R2Z0 102 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 RAB29O14966 203 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 SYNGR2O43760 224 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 SCGB2A1O75556 95 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 TMEM50AO95807 157 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 PPYP01298 95 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 HTR1DP28221 377 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 FUT6P51993 359 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 ZNF121P58317 390 aaPredicted RBP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 GNB1P62873 340 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 CFHR3Q02985 330 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 KISS1Q15726 138 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 FAM201AQ5SY85 155 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 LYPD2Q6UXB3 125 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 RBPMS2Q6ZRY4 209 aaKnown RBP5.29□□□□□ -1.56
HOXA9-206ENST00000497089 Q6ZS49 121 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 WDR86Q86TI4 376 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 TBC1D26Q86UD7 250 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 BPIFA4PQ86YQ2 179 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 C11orf53Q8IXP5 236 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 GCSAMQ8N6F7 178 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 NHLRC2Q8NBF2 726 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 OR10AG1Q8NH19 301 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 C5orf30Q96GV9 206 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 CLEC7AQ9BXN2 247 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 GTSF1LQ9H1H1 148 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 VSIRQ9H7M9 311 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 NPVFQ9HCQ7 196 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 ESM1Q9NQ30 184 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 IL36GQ9NZH8 169 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 KAAG1Q9UBP8 84 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 ZNF391Q9UJN7 358 aa5.29□□□□□ -1.56
HOXA9-206ENST00000497089 FAM231BA6NCW3 169 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 OOEPA6NGQ2 149 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 OR4C46A6NHA9 309 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.28□□□□□ -1.56
HOXA9-206ENST00000497089 HMGB3O15347 200 aaKnown RBP5.28□□□□□ -1.56
HOXA9-206ENST00000497089 CRXO43186 299 aaPredicted RBP5.28□□□□□ -1.56
HOXA9-206ENST00000497089 ENSAO43768 121 aaKnown RBP5.28□□□□□ -1.56
HOXA9-206ENST00000497089 HBZP02008 142 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 APCSP02743 223 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 SERPINE2P07093 398 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 OR5AL1P0C617 328 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 HIST1H1EP10412 219 aaKnown RBP5.28□□□□□ -1.56
HOXA9-206ENST00000497089 FABP2P12104 132 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 NTF3P20783 257 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 CX3CL1P78423 397 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 SLC38A11Q08AI6 406 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 Q56UQ5 140 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 TMEM97Q5BJF2 176 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 TEX36Q5VZQ5 186 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 TMEM136Q6ZRR5 245 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 HAPLN4Q86UW8 402 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 MMD2Q8IY49 270 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 RPP25LQ8N5L8 163 aaKnown RBP5.28□□□□□ -1.56
HOXA9-206ENST00000497089 OR51E1Q8TCB6 317 aa5.28□□□□□ -1.56
HOXA9-206ENST00000497089 WIPF2Q8TF74 440 aaPredicted RBP5.28□□□□□ -1.56
HOXA9-206ENST00000497089 DAZAP1Q96EP5 407 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms