RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 TNS3Q68CZ2 1445 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 TRGV2A0A075B6R0 118 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 TRDV1A0A1B0GX56 115 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 DUXBA0A1W2PPF3 345 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 ODAMA1E959 279 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 C7orf71A4D174 169 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM212A6NML5 194 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 F8W036 122 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 K7EP13 123 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 K7ERJ3 54 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 M0R378 163 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 TAX1BP3O14907 124 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 CST8O60676 142 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 CRPP02741 224 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 ZNF705BP0CI00 300 aaPredicted RBP0.75□□□□□ -2.29
VPS26A-208ENST00000497022 SDC4P31431 198 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 PLCXD2Q0VAA5 305 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 SMCO1Q147U7 214 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 SPCS2Q15005 226 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 SCGB2B2Q4G0G5 96 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 SPANXN5Q5MJ07 72 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 GLYATL3Q5SZD4 288 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 DCUN1D2Q6PH85 259 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 STX19Q8N4C7 294 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 AQP3Q92482 292 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 PLEKHB2Q96CS7 222 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 ZHX1-C8orf76Q96EF9 292 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 MALSU1Q96EH3 234 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 BORCS8Q96FH0 119 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 YPEL2Q96QA6 119 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 GPX7Q96SL4 187 aaPredicted RBP0.75□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM70Q9BUB7 260 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 PBDC1Q9BVG4 233 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 PBOV1Q9GZY1 135 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM126AQ9H061 195 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 TAS2R4Q9NYW5 299 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 PCTPQ9UKL6 214 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 NUBP2Q9Y5Y2 271 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 COL4A5P29400 1685 aa0.75□□□□□ -2.29
VPS26A-208ENST00000497022 TCOF1Q13428 1488 aaKnown RBP0.74□□□□□ -2.29
VPS26A-208ENST00000497022 BCL9LQ86UU0 1499 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 OVOS2A0A0J9YW53 1432 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 RGS12O14924 1447 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 ARHGAP31Q2M1Z3 1444 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 OVOS2Q6IE36 1432 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 PRG4Q92954 1404 aaPredicted RBP0.74□□□□□ -2.29
VPS26A-208ENST00000497022 YTHDC2Q9H6S0 1430 aaKnown RBP0.74□□□□□ -2.29
VPS26A-208ENST00000497022 CASP8AP2Q9UKL3 1982 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 PTPRFP10586 1907 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 FER1L6Q2WGJ9 1857 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 TRAV36DV7A0A075B6V5 113 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 TRGV10A0A0A0MS01 117 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 CCDC160A6NGH7 325 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 RIIAD1A6NNX1 92 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 TSTD3H0UI37 97 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 GABARAPH6UMI1 98 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM256-PLSCR3K7ERE1 68 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 DLEU1O43261 78 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 OR2T1O43869 369 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 BANF1O75531 89 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 APOA2P02652 100 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 CXCL1P09341 107 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 BAALC-AS2P0C853 105 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 MIFP14174 115 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 NFYBP25208 207 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 RAB5CP51148 216 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 CKS1BP61024 79 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 MSMO1Q15800 293 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 BCL2L15Q5TBC7 163 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 FKBP1CQ5VVH2 108 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 SAMD13Q5VXD3 122 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 C22orf39Q6P5X5 142 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 SCIMPQ6UWF3 145 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 FP248Q71RG6 208 aaPredicted RBP0.74□□□□□ -2.29
VPS26A-208ENST00000497022 ANGPTL5Q86XS5 388 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 PDZD9Q8IXQ8 264 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 NUP35Q8NFH5 326 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 OR4C6Q8NH72 309 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 CANT1Q8WVQ1 401 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 CGREF1Q99674 301 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 SLC50A1Q9BRV3 221 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 PRADC1Q9BSG0 188 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 C6orf62Q9GZU0 229 aaPredicted RBP0.74□□□□□ -2.29
VPS26A-208ENST00000497022 TMEM138Q9NPI0 162 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 TRAPPC2LQ9UL33 140 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 MED31Q9Y3C7 131 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 CUL7Q14999 1698 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 RIMBP3CA6NJZ7 1639 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 RIMBP3BA6NNM3 1639 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 RIMBP3Q9UFD9 1639 aa0.74□□□□□ -2.29
VPS26A-208ENST00000497022 MYO18AQ92614 2054 aaKnown RBP0.74□□□□□ -2.29
VPS26A-208ENST00000497022 ZNF518AQ6AHZ1 1483 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 OVOS2A0A0G2JMS6 1433 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 BCL9O00512 1426 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 SOGA1O94964 1423 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 ROCK2O75116 1388 aaKnown RBP0.73□□□□□ -2.29
VPS26A-208ENST00000497022 NALCNQ8IZF0 1738 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 TRBV6-5A0A0K0K1A5 114 aa0.73□□□□□ -2.29
VPS26A-208ENST00000497022 A0A1B0GX51 115 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms