RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SIGLEC15Q6ZMC9 328 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 GOLT1AQ6ZVE7 132 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 FAM110DQ8TAY7 271 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-220ENST00000496711 NEU1Q99519 415 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 HSPB9Q9BQS6 159 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 HIGD1CA8MV81 97 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 PKIAP61925 76 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 OR10J3Q5JRS4 329 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 CCL19Q99731 98 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 TXN2Q99757 166 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 PIMREGQ9BSJ6 248 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 PRSS22Q9GZN4 317 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 FBXL7Q9UJT9 491 aa10.22□□□□□ -0.77
GARNL3-220ENST00000496711 TRAV8-1A0A0A6YYK1 113 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 OR2T8A6NH00 312 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 F2Z2F3 143 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 TSTD3H0UI37 97 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 BMPR1BO00238 502 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 IGLV2-11P01706 119 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 P01737 135 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 IGHV3-23P01764 117 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 APCSP02743 223 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 PAFAH1B2P68402 229 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 IQCJQ1A5X6 159 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 C9orf152Q5JTZ5 239 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 LINC00322Q6ZN03 302 aaPredicted RBP10.21□□□□□ -0.77
GARNL3-220ENST00000496711 ATP5L2Q7Z4Y8 100 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 TMEM75Q8N9X5 138 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 ZNF414Q96IQ9 312 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 C17orf77Q96MU5 243 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 GNB4Q9HAV0 340 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 AKAP6Q13023 2319 aa10.21□□□□□ -0.77
GARNL3-220ENST00000496711 CENPVL3A0A0U1RRI6 287 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 K7EQM0 130 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 ATP6V0E1O15342 81 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 PDE6HQ13956 83 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 ECSCRQ19T08 205 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 KIAA1644Q3SXP7 199 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 UNQ5815/PRO19632Q6UWF5 114 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 PRNTQ86SH4 94 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 VN1R17PQ8TDU5 208 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 MS4A10Q96PG2 267 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 MED13LQ71F56 2210 aa10.21□□□□□ -0.78
GARNL3-220ENST00000496711 TRAV20A0A0B4J274 112 aa10.2□□□□□ -0.78
GARNL3-220ENST00000496711 A8MWL6 223 aa10.2□□□□□ -0.78
GARNL3-220ENST00000496711 SRIP30626 198 aa10.2□□□□□ -0.78
GARNL3-220ENST00000496711 BCL6BQ8N143 479 aaPredicted RBP10.2□□□□□ -0.78
GARNL3-220ENST00000496711 DAZAP1Q96EP5 407 aaKnown RBP10.2□□□□□ -0.78
GARNL3-220ENST00000496711 NPIPB6E9PJ23 425 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 CTSGP08311 255 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 PAX8Q06710 450 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 SLAQ13239 276 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 KLK9Q2XQG4 91 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 CIARTQ8N365 385 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-220ENST00000496711 GFRA4Q9GZZ7 299 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 AAMDCQ9H7C9 122 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 KLK9Q9UKQ9 250 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 NDUFS8O00217 210 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 COL8A1P27658 744 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 TCF24Q7RTU0 167 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 OR4B1Q8NGF8 309 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 ZNF502Q8TBZ5 544 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 C10orf105Q8TEF2 133 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 SAMD10Q9BYL1 202 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 PRO1933Q9H354 126 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 RABAC1Q9UI14 185 aa10.19□□□□□ -0.78
GARNL3-220ENST00000496711 SOX21Q9Y651 276 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-220ENST00000496711 IGHV4-61A0A0C4DH41 118 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 DIRC3C9JPN6 131 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 ZNF253O75346 499 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 SCGB1D1O95968 90 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 RPL7P18124 248 aaKnown RBP10.18□□□□□ -0.78
GARNL3-220ENST00000496711 S100A7P31151 101 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 PSG3Q16557 428 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 C15orf32Q32M92 178 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 GDF5OSQ5U4N7 250 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 C5orf56Q8N8D9 126 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 KCNS1Q96KK3 526 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 ZFP30Q9Y2G7 519 aa10.18□□□□□ -0.78
GARNL3-220ENST00000496711 IGHV1-69DA0A0B4J2H0 117 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 FAM231BA6NCW3 169 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 VWC2LB2RUY7 222 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 IGHV1-69P01742 117 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 DDTP30046 118 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 HBBP68871 147 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 RHOGP84095 191 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 PSG9Q00887 426 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 CLEC2AQ6UVW9 174 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 GTSF1Q8WW33 167 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 NAGKQ9UJ70 344 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 PSG8Q9UQ74 426 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 TRAV40A0A0B4J280 105 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 SERTM2A0A1B0GWG4 89 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 M0R3E3 92 aa10.17□□□□□ -0.78
GARNL3-220ENST00000496711 GPR183P32249 361 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms